Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1335 ATGAGTTGTTTTAGCTGTTGTGAAGAGGATAATTTCAACAAGATTACAGAAACTGGAGGACAACATGTTGTGAAAAATTCACCAGGGAATGATGAAAACTATCCTGCCTCTGAACCTGCAAAGCCAGGTGGTCAGATTGTTAAAGTCCAGCCCATTGAAGTTCCTGCTATACCGGCGGATGAACTAAAAGAAGTTACAGATAATTTTGGACAAGACTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGCGTTCTCAAAAGTGAAAAGGCTGCAGCAATCAAGAAATTAGATGCCAGTAAACAGCCTGATGATGAATTTTTAGCCCAGGTTTCAATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAATTGCTTTCTTATTGTGTTGATGGAGGTTCCCGTGTTCTTGCTTATGAGTTTGCGTCTAATGGGTCTCTTCATGATATTTTACATGGCAGAAAAGGTGTAAAAGGAGCACAGCCTGGTCCTGTTTTGACATGGGCACAGAGAGTAAAAATTGCTGTAGGGGCTGCAAGAGGGCTAGAGTACTTGCATGAGAAGGCTAATCCCCACATTATCCACAGGGACATCAAGTCAAGCAATGTGCTAATATTTGATGATGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAAGCTCCTGACATGGCTGCACGTCTTCATTCCACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGTTTTGGTGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAACCCGTTGATCATACACTACCACGTGGACAGCAGAGTCTGGTTACTTGGGCTACACCAAAACTCAGTGAGGATAAAGTCAAGCAGTGTGTTGATGCAAGGCTTGGAGGAGAATACCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCACTGTGTGTACAATATGAAGCTGATTTTAGACCAAATATGAGCATTGTAGTGAAAGCTCTTCAACCCTTGTTGACTGCACGACCTGGACCTGCTGGTGAAACAACAAATTAA 1086 0.4217 MSCFSCCEEDNFNKITETGGQHVVKNSPGNDENYPASEPAKPGGQIVKVQPIEVPAIPADELKEVTDNFGQDSLIGEGSYGRVYYGVLKSEKAAAIKKLDASKQPDDEFLAQVSMVSRLKHENFVQLLSYCVDGGSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDARLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLTARPGPAGETTN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1335 361 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Aev09g1335 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 359 - -
Aev09g1335 361 Gene3D Phosphorylase Kinase; domain 1 40 143 - -
Aev09g1335 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Aev09g1335 361 SUPERFAMILY Protein kinase-like (PK-like) 48 345 IPR011009 -
Aev09g1335 361 MobiDBLite consensus disorder prediction 20 42 - -
Aev09g1335 361 SMART serkin_6 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g1335 361 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g1335 361 Gene3D Transferase(Phosphotransferase) domain 1 144 353 - -
Aev09g1335 361 Pfam Protein tyrosine and serine/threonine kinase 73 345 IPR001245 GO:0004672|GO:0006468
Aev09g1335 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1335 Aev-Chr9 17177269 17183694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1335 60 346 Receptor kinase-like Gene Family AT4G02010 50.859 3.29e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Aev09g1335 PK_Tyr_Ser-Thr 9.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1335 K13436 - gmx:100808383 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0688 06 4722371 4730188 Aev09g1335 09 17177269 17183694 PCT