Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1330 ATGGGGTGCGTGATTAGCCGAGAGGTGCAATCGGGAATTATCTCTGAGGTGAAGGAGGAGAAGAGCTTGAGTGTTGAGTCCAACAGGAGGGGTGATGATGTGTCCACAAGTAAAGTTGAGGGTAACGAGGTAGAGGTTCAGAATGGCGAGAATCAGAAGGAGAAGAAAGAGAATGGTGGCGATAATGGTGTTCAACCTCAGCGACAAAAGGGTGAAAGGAGAAGATCAAAGCCGAACCCAAGACTGAGTAATCCTCCTAAGCATTTAAGGGGGGAGCAAGTAGCAGCAGGGTGGCCACCGTGGCTTACAGCGGTTTGTGGGGAAGCACTTAGTGGGTGGATTCCTCGAAAGGCTGACACATTTGAGAAAATAGATAAGATCGGCCAAGGAACATATAGTAATGTGTACAAAGCAAAAGACATGTTGACCGGTAAGATTGTTGCATTGAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGCGTCAAGTTCATGGCTAGAGAGATAATTATTTTGCGAAGATTGGATCATCCCAATGTTGTAAAGCTAGAAGGTTTAGTTACGTCAAGAATGTCTTTGAGTTTGTATCTGGTGTTTGATTACATGGTGCATGATTTAGCTGGACTTGCAGCAAGCCCTGAAATCAAGTTTACAGAACCCCAGGTCAAATGTTATATGCATCAACTGCTATCAGGACTTGAGCACTGTCATAATCGAAATGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAATACTTAAGATTGCTGACTTTGGACTTGCATCATTCTTTGATCCGAACCGCAGACAAACCATGACTAATCGTGTAGTTACCCTTTGGTATCGACCTCCAGAGTTGCTTCTTGGTGCCACAGAGTATGGTGTAGCCATTGACCTTTGGAGTGCTGGTTGCATTTTAGGAGAGTTATTGGCTGGGAAACCAATTATGCCTGGACGTACAGAGGTGGAGCAGTTGCATAAGATATACAAACTTTGTGGATCGCCCTCTGATGAGTATTGGAGGAAATCGAAGTTACCCAATGCTACCTTGTTTAAACCAAGAGAACCATACAAGAGATGCATAAGAGAAACATTCAAAGATTTTCCACCTTCTGCCCTACCCCTTATTGATACTCTTCTTGCAATTGATCCAGCAGAACGGAAAACTGCCTCAGACGCTCTAAGAAGTGAGTTCTTTACCACAGAACCTAATGCTTGTGATCCTTCTACTCTTCCAAAATATCCCCCAACCAAGGAACTGGATGCTAAACGACGGGATGATGAAGCAAGGAGATTAAGAGCTGCAGGCAAAGCTCATGCTGATGGTGCAAAGAAGCATCGAACACGTGAACGAGCAGTAAAAGCTGTTCCTGCTCCTGAAGCCAATGCTGAGCTTCAACCCAATATTGATAGAAGGCGCCTAATAACTCATGCGAACGCTAAGAGCAAGAGCGAAAAGTTCCCTCCACCTCATGAAGATGGACAACTTGGCTTTCCTTTGGGATCTTCAAATCATATTGATCCAGATATCGTCCCTCATGACGTTTCATTCGTTTCGACCTACTCGAAAGAACCATTCCAAGCTTGGTCAGGTCCCATTGGTGTGCCAAAGCAGAAGAAACACAATGTTGCAGGTGATGCATTGGACTTATCAAAACCACATAAAGGTGCTCCCAGAGATAAGGTTAAAGGAAAGAAAATCATAGTTTAG 1728 0.4387 MGCVISREVQSGIISEVKEEKSLSVESNRRGDDVSTSKVEGNEVEVQNGENQKEKKENGGDNGVQPQRQKGERRRSKPNPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIIILRRLDHPNVVKLEGLVTSRMSLSLYLVFDYMVHDLAGLAASPEIKFTEPQVKCYMHQLLSGLEHCHNRNVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNRRQTMTNRVVTLWYRPPELLLGATEYGVAIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWRKSKLPNATLFKPREPYKRCIRETFKDFPPSALPLIDTLLAIDPAERKTASDALRSEFFTTEPNACDPSTLPKYPPTKELDAKRRDDEARRLRAAGKAHADGAKKHRTRERAVKAVPAPEANAELQPNIDRRRLITHANAKSKSEKFPPPHEDGQLGFPLGSSNHIDPDIVPHDVSFVSTYSKEPFQAWSGPIGVPKQKKHNVAGDALDLSKPHKGAPRDKVKGKKIIV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1330 575 SMART serkin_6 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g1330 575 MobiDBLite consensus disorder prediction 423 460 - -
Aev09g1330 575 PANTHER OS01G0367700 PROTEIN 46 544 - -
Aev09g1330 575 MobiDBLite consensus disorder prediction 552 575 - -
Aev09g1330 575 Pfam Protein kinase domain 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g1330 575 ProSiteProfiles Protein kinase domain profile. 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g1330 575 CDD STKc_CDK9_like 121 405 - -
Aev09g1330 575 MobiDBLite consensus disorder prediction 1 93 - -
Aev09g1330 575 PANTHER CELL DIVISION PROTEIN KINASE 46 544 - -
Aev09g1330 575 SUPERFAMILY Protein kinase-like (PK-like) 116 411 IPR011009 -
Aev09g1330 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Aev09g1330 575 MobiDBLite consensus disorder prediction 407 463 - -
Aev09g1330 575 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Aev09g1330 575 Gene3D Phosphorylase Kinase; domain 1 108 203 - -
Aev09g1330 575 Gene3D Transferase(Phosphotransferase) domain 1 204 444 - -
Aev09g1330 575 MobiDBLite consensus disorder prediction 13 39 - -
Aev09g1330 575 MobiDBLite consensus disorder prediction 47 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1330 Aev-Chr9 17118146 17124184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1330 113 443 Core Cell Cycle Gene Families AT5G10270 52.450 2.08e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aev09g1330 Pkinase 1.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1330 K08819 - gmx:100817289 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0879 06 5954723 5958160 Aev09g1330 09 17118146 17124184 ECH
Aev09g1330 09 17118146 17124184 Aev09g1330 09 17118146 17124184 ECH