Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1259 ATGTTTCAATTCAAGGCCTTTATAAGGACCAAATTCTCTTCCCAAAAGAAGACCCAACACCTTTTCTTCATCATCAACTTCACCCTTCCCCCCTCTTCTTCAATTCACTCTTCGCTTCTTCAGCATCAAATTTGTGTGTATGAGTTTCCCACACTGATCGAGAAAGAGAGCCCAAAAAAGAAAAAGAGAAAAAAGTCCCCAAAAAATAGAGGCATGGCACTAAAAGCAGTGGTGTATCCACAAACACAAGACCCATTTGGTTATGGAATGAACAAAGATTTTTACAACTATAATAACTTTCATGCTGGTGCAGGCAATTGGATCTATGAAGACCTCAACAACCTTGAAAGAGAAGAAGATCAGCAAGAAGGATCTATCAATTTTCTCGAGAACCAAACAGAGAATAACAACAACAAGAAGTACCCTTATGGAGATTGGAATAAAAAAAATAGTAATAATAATAGCTCCTCCTCCACATCAATGCTACTAATACCACCACCTCATCATCAACACTTGTCATCAGACAATAATCTATTGTCTGCGGAAAGCAATGATCTGAGCAACAATCAAAACTTTGATAGCTCAAACTCAACGACAGTAGCGTCTCATCGCCCCAAGAGGCGCAGAGCAAAGAGTAAGAAAAACAAGGAACAGATTGAGAACCAGAGAATGACTCACATTGCTGTTGAGCGGAACAGAAGGAAGCAGATGAATGAGTACCTCTCTCTTCTCCGCTCTCTAATGCCTGACTCTTATGTCCAAAGGGGTGATCAAGCTTCTATAATTGGAGGTGCTATTAACTTTGTGAAGGAGCTTGAGCAGAGGATGCAGTTTCTTGGTTCTCATCAGAAGAAATCTGATATTGGAGGAAGCAGAGCCTTTTGTGAGTTCTTCACATTCCCACAGTATTCATCAGCAACCACAAGTGCCAATAGTACTGCTGGCTGTGACATAATAAATTCTTCTTCAGTGGGCATAGGTGAGCATGAGGTTCACCCTGGCATTGCTGATATAGAAGTGACAATGGTTGAAAGCCATGCAAATCTCAAGATAAGGTCAAACAAGAGGCCAAAGCAGCTCCTTAAGATTGTTTCTGCTTTGCACAACATGCGCTTCACTATCTTGCACCTAAATGTTACCACCACCCGTGAAATTGTCCTCTATTCTCTCAGTGTTAAGGTAGAAGATGATTGCAAGTTGGGATCGGTAGATGACATTGCTGGAGCTGTATACCAACTGATGGATAGGATTCAACAAGAGGCAATGTTGAATTAA 1275 0.4094 MFQFKAFIRTKFSSQKKTQHLFFIINFTLPPSSSIHSSLLQHQICVYEFPTLIEKESPKKKKRKKSPKNRGMALKAVVYPQTQDPFGYGMNKDFYNYNNFHAGAGNWIYEDLNNLEREEDQQEGSINFLENQTENNNNKKYPYGDWNKKNSNNNSSSSTSMLLIPPPHHQHLSSDNNLLSAESNDLSNNQNFDSSNSTTVASHRPKRRRAKSKKNKEQIENQRMTHIAVERNRRKQMNEYLSLLRSLMPDSYVQRGDQASIIGGAINFVKELEQRMQFLGSHQKKSDIGGSRAFCEFFTFPQYSSATTSANSTAGCDIINSSSVGIGEHEVHPGIADIEVTMVESHANLKIRSNKRPKQLLKIVSALHNMRFTILHLNVTTTREIVLYSLSVKVEDDCKLGSVDDIAGAVYQLMDRIQQEAMLN* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1259 424 Gene3D - 209 285 IPR036638 GO:0046983
Aev09g1259 424 PANTHER MAX DIMERIZATION, MAD 72 424 - -
Aev09g1259 424 Pfam Helix-loop-helix DNA-binding domain 222 273 IPR011598 GO:0046983
Aev09g1259 424 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 72 424 - -
Aev09g1259 424 Coils Coil 112 132 - -
Aev09g1259 424 MobiDBLite consensus disorder prediction 128 201 - -
Aev09g1259 424 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 221 272 IPR011598 GO:0046983
Aev09g1259 424 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 221 281 IPR036638 GO:0046983
Aev09g1259 424 SMART finulus 227 278 IPR011598 GO:0046983
Aev09g1259 424 MobiDBLite consensus disorder prediction 128 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1259 Aev-Chr9 15866757 15869425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1259 72 394 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 41.667 2.14e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g1259 HLH 8.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1259 - - gmx:100777413 385.956