Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1122 ATGAGTGGCAGTAGCAGGAGCAGGAGAAGCACGAACGAAGAACACCACGATCTCGAGCTAGAGAAGACTCGTTTGCTCAGTTTAGCCCTCGATTTCGGTTTCGACCATCACTCCGCCACCAAATGCTTGCATCGTCTCATCGCTCTCTACGGTGAGGATGGTCGGGATTTCATTACCGTGGAGCACTGCGGCGACGATTTTATTGCGGCACTGGCTGAGTCGATGGAAGGTACTGAGGAATGGGATGATTTGCAGGAATTGGAGTCGCAGGCTTGTGGAACATTGGCTCAGGTGCTTGACAAGAGTATTGCTGTTGGTGGTGGATGTGGTGATGGTAATGATGATGATGATGGTGGTGGTTCGGTTTGTTACATTGATGTTATTGATGATTCGCCTGAGCCACGGAAGCAGCAGAGGAAAGTAGTGGAGTTGGATTTGAGCGAGGATGATGAGGATATGGAGTTTGGTGTTTCGAGGGGAAGAGCAAATTGCGTGCCTTCTGGTTCTGCAAAATCTGTGGATTGCAGAAGTGGCATCACTCAAGGCTCAGTTGTATCAACTTCAAGCAAAACACAATCTTCCTCAGCATCAAAGGATGTAAACAGTACTCTCACCTATGAAGAACTGCAGGCCCTAGACGATATTGAATTGGCAAATGTTGTTATTTTTGGCAATAGGACATTTCGACCGTTGCAGCATCAAGCATGCAAAGTAGCTTTGGCAAAGAAAGATTCTTTTATTCTTATGCCTACTGGGGGTGGTAAATCACTTTGCTATCAGCTTCCAGCAACTCTTCAACCAGGTGTCACAGTAGTTGTATCTCCCTTACTTTCACTCATTCAGGATCAGATAATCACGCTAAACCTCAAGTTTGGAATACCAGCTACTTTTTTAAATTCTCAACAAACTGCTTCCCAGTCCGCAGCTGTCCTGCAAGAGCTAAGAAAAGACAAACCATCATGCAAGCTCTTGTACGTGACTCCCGAGAGGATTGTTGGAAACCAATCATTTGTTGAGACTCTAAAATGCATGCATCGGAAGGGACAGCTAGCAGGATTTGTTGTTGATGAGGCACACTGTGTTAGCCAATGGGGACATGATTTCCGGCCTGATTATCGGGGATTAGGATCTCTTAAGCTAAACTTCCCTGATGTACCTGTCATGGCATTGACTGCAACTGCAACCCACCCAGTTCGTGAGGACATCTTAAATGCCTTAAGAATCCCCCGTGCTCTTGTTCTTGAAAGAAGCTTTGACAGACCAAACTTGAAGTATGAAGTGATTGTAAAGACAAAGGAACCACTGAAGCAGCTGGGACAGCTACTCCTGGATCACTTCAGAAATCAGTGTGGAATTGTTTACTGCCTTTCAAAAAGTGAGTGTGTCGAGGTCTCAAAATTTTTGAACGAGACATGCAAAGTTAAAACTGTTTATTACCATGCTGGCTTGGCTGCTCGTCAGAGAGTCGCCGTTCAAAGGAAATGGCATGAAGGAGAGGTCCATGTTGTTTGTGCAACTATTGCTTTTGGAATGGGGATAGACAAAGCTGATGTGCGCTTTGTCATCCATAATACGATGTCAAAATCAGTTGAAAGTTATTATCAAGAATCAGGAAGGGCCGGAAGGGATAATCTTCCTGCAGTTTGCATTGCTTTATACCAAAAGAAAGATTTCAGTAGAGTTGTATGCATGATTAGAAATGGCCAAGGATATAAAAAGGAAAGCTTCAAGACAGCAATGGCTCAAGCCAAAAAGATGCAACAGTACTGTGAACTAAAGGTTGAATGCCGAAGAGAAACTTTACTGAAACACTTTGGAGAATCTTTTGACAGAAAAGGCTGCAAGTATGGATCTAACCCATGTGATAACTGTGTCAAGATTACACTATGA 1890 0.4413 MSGSSRSRRSTNEEHHDLELEKTRLLSLALDFGFDHHSATKCLHRLIALYGEDGRDFITVEHCGDDFIAALAESMEGTEEWDDLQELESQACGTLAQVLDKSIAVGGGCGDGNDDDDGGGSVCYIDVIDDSPEPRKQQRKVVELDLSEDDEDMEFGVSRGRANCVPSGSAKSVDCRSGITQGSVVSTSSKTQSSSASKDVNSTLTYEELQALDDIELANVVIFGNRTFRPLQHQACKVALAKKDSFILMPTGGGKSLCYQLPATLQPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQTASQSAAVLQELRKDKPSCKLLYVTPERIVGNQSFVETLKCMHRKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSLKLNFPDVPVMALTATATHPVREDILNALRIPRALVLERSFDRPNLKYEVIVKTKEPLKQLGQLLLDHFRNQCGIVYCLSKSECVEVSKFLNETCKVKTVYYHAGLAARQRVAVQRKWHEGEVHVVCATIAFGMGIDKADVRFVIHNTMSKSVESYYQESGRAGRDNLPAVCIALYQKKDFSRVVCMIRNGQGYKKESFKTAMAQAKKMQQYCELKVECRRETLLKHFGESFDRKGCKYGSNPCDNCVKITL* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1122 629 Pfam Helicase conserved C-terminal domain 437 543 IPR001650 -
Aev09g1122 629 Pfam DEAD/DEAH box helicase 230 398 IPR011545 GO:0003676|GO:0005524
Aev09g1122 629 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 351 360 IPR002464 -
Aev09g1122 629 Pfam RecQ zinc-binding 556 624 IPR032284 -
Aev09g1122 629 Gene3D - 184 419 IPR027417 -
Aev09g1122 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 565 IPR027417 -
Aev09g1122 629 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 437 587 IPR001650 -
Aev09g1122 629 PANTHER DNA HELICASE RECQ FAMILY MEMBER 38 625 - -
Aev09g1122 629 SMART ultradead3 224 428 IPR014001 -
Aev09g1122 629 CDD DEXHc_RecQ 222 419 - -
Aev09g1122 629 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 222 626 IPR004589 GO:0004386|GO:0006310
Aev09g1122 629 CDD SF2_C_RecQ 420 553 - -
Aev09g1122 629 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 236 412 IPR014001 -
Aev09g1122 629 SMART helicmild6 462 544 IPR001650 -
Aev09g1122 629 PANTHER BLOOM SYNDROME PROTEIN 38 625 - -
Aev09g1122 629 Gene3D - 420 627 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1122 Aev-Chr9 13454790 13462137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1122 353 542 Eukaryotic Initiation Factors Gene Family AT5G11170 25.641 1.64e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1122 K10899 - gmx:100806070 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1122 09 13454790 13462137 Aev09g1122 09 13454790 13462137 ECH