Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1093 ATGGCGACGAGGAATCGCACTCTCCTCTTCAGGAAGCACCGAGATGCACTGAAGAGCGTTCGCGCTCCTTCCTCCTCCTCGGGGCCCTCTACCTCCTCCACCGCCGGTGGTGGCCGCGGCGGCCCCGTCATCGAGATGGTCAGCACCTCGCTCCTCAACCCTAATCGCTCCTACACTCCCCTCAGTACCGAGGATCCCGGTAGTTCGAGTAAGGGTTTAAATCCAATTACTGTTGGGTTACCTCCAGCGTGGGTGGATTTATCTGAAGAAATATCAGCAAATGTGCAACGTGCACGAACAAAAATGGCGGAGTTGACCAAGGCTCATGCGAAGGCTTTAATGCCTTCTTTTGGGGATGGCAAGGAAGAACAACGTACTATTGAGTCCCTAACGCACGAGATAACTGACTTGATAAAGAAATCAGAGAAGAGACTGCAGAGGCTTTCTGCTTCAGGGCCTTCTGAGGATTCCAACGTGAGGAAAAATGTGCAGCGTTCTCTTGCTACTGACCTTCAAAACCTCTCTGTAGAGCTACGCAAGAAACAATCAACATATTTGAAGCGCCTAAGGCAGCAGAAAGAGGGTCAAGATGGGGTTGATCTAGAGATCAATATGAATGGAAGTAAATCCACATACGAAGATGATGACTTGGATAGTATGATATTTAATGAACATCAGATGGCCAAGCTGAAAAAAAGTGAAGCATTCACAGTAGAAAGAGAAAAGGAGATCCAACAGGTTGTTGAATCTGTAAATGAGCTTGCTCAAATTATGAAGGATTTATCAGTCCTAGTCATAGACCAGGGAACCATTGTGGACAGAATAGACTACAACATTCAGAATGTAGCTACTACAGTTGAGGACGGCCTTAAACAACTGCAGAAGGCAGAGAGAAGTCAGAAAAAGGGGGGAATGGTAATGTGTGCTACTGTGCTTCTTATCATGTGCTCCGTTATGTTGGTTCTCTTAATCCTTAAGGAAATTATCTTGTGA 993 0.4642 MATRNRTLLFRKHRDALKSVRAPSSSSGPSTSSTAGGGRGGPVIEMVSTSLLNPNRSYTPLSTEDPGSSSKGLNPITVGLPPAWVDLSEEISANVQRARTKMAELTKAHAKALMPSFGDGKEEQRTIESLTHEITDLIKKSEKRLQRLSASGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSTYLKRLRQQKEGQDGVDLEINMNGSKSTYEDDDLDSMIFNEHQMAKLKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERSQKKGGMVMCATVLLIMCSVMLVLLILKEIIL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1093 330 SMART tSNARE_6 229 296 IPR000727 -
Aev09g1093 330 SMART SynN_4 75 190 IPR006011 GO:0016020
Aev09g1093 330 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 234 296 IPR000727 -
Aev09g1093 330 Pfam SNARE domain 270 322 IPR000727 -
Aev09g1093 330 PANTHER SYNTAXIN 1 325 IPR045242 -
Aev09g1093 330 ProSitePatterns Syntaxin / epimorphin family signature. 240 279 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aev09g1093 330 Coils Coil 88 108 - -
Aev09g1093 330 Gene3D - 81 288 - -
Aev09g1093 330 SUPERFAMILY t-snare proteins 80 289 IPR010989 GO:0016020|GO:0016192
Aev09g1093 330 MobiDBLite consensus disorder prediction 1 45 - -
Aev09g1093 330 MobiDBLite consensus disorder prediction 20 37 - -
Aev09g1093 330 CDD SNARE_syntaxin16 239 295 - -
Aev09g1093 330 PANTHER TARGET SNARE COILED-COIL-LIKE DOMAIN-CONTAINING PROTEIN-RELATED 1 325 - -
Aev09g1093 330 MobiDBLite consensus disorder prediction 54 73 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1093 1 330 SNARE and Associated Proteins AT5G26980 78.485 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1093 K08489 - gmx:100796741 550.051