Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1081 ATGGGAAGGGGAGGCAAGGTTGGTAAGAAAGGAAATTCCAGAAAAAGGGATTGGTCGAATAAGGCCAGTTCTGATGATTCGGATGAGGACTATGTGGTTTCGGATGAGGAATATTCCTCTTCTTTAGATGGACTTGCATCAGAGGAGGAGGGGGAGGAGGAGTGTCCAAGAGTGAGGAATTTCAGTAGATCCAAGGCAAAAAATGGAATTTGTGGTCGCCAGAGAAATGTAAGTAAAACCTCACGAAAGAGGGGAAAGATTACATATGAAGATGAAGAGGATGAAGAAGGAGAAGCAGGGGAGGAGGAAGAGAAGGAGGAGGCAGAGAAAGATGAGGATGAGGAGGAAGTGCAGGAGGAGGAGGATGATGAGTATAAGGAGGAAGATGATGAGGAGTATGTGGAAGAGGAGGAAGAAAAGGAGGAGGATGAGGATGAGGATGAGGAAAATGAAGGAATAGGGAATTTCAGTAGGTCAAAGGCCAGAAATGGTGTTTATGGTCAGCCAAAGAATGCTAGTAAGACCTCAACAAAAAGGAGAGGGATTACATTTGCAGAACCACTAGAAGAAGATGAAGAGGAGAAGGAAAAGGATGAGGGGGACATGAAGGACAAAGAAGAGGAGGGAGACAAGAATGACAAAGAAGAGGAAGAGAACGACAGATACAAGGAAGAGGAGGAGAACGAGAGCGAAAAGGTTGTGGAGGAGGGAAAGAAGGACAAGGAAGAGGAGGAGTATGACGAAGAGAAAGTGGAGATGGAAGGAGATGGTGGGGAAGAGGAAGAGACAGGAGATGAGTGGAAAGAGGAAGAGGATGGAGATGCTGATGAAGAGGATGAGGATTTTGATTGTGATGATGATGATGAGTTTACACCAGAGGAAGATGGTTATTCAGATGAGGAGGAGGAAGAAATGAGGGGAAGAGGGAAGAACAATAATGGCATGACAAATAGAAAGAAGGTTTCACAGAAAAGGGCCTCTGTAGTTTCTACTAGAGGCCGAAAAAAGCGAAGTTCTAGAGCAGCAAAGAGGCAATCGAGAAACAAAAAGAGAAGGAATGGTAGGATAAGGAAGACAGTAAAAAGTGGCGATGAAGATGATTTTATAGATAATGGCCCTACCATCAGGACAGCAAGTAGGGATAAACGGGGCCGGAAGAGGAGAAGGGTTGTTCGTTCAGATTCAGATTGTGTGTCTTCTGGATCACCGGATGTTGAGTATACCATCTCTGAAGAAGAGAGAGAACAGGTAAGAGAAGCCAACGAGTTGTGTGGAGGCTCAAGAATCAACTTGAGAAGTTCTTCCCTTCTGATAAAAAATGAAGAGGATGGAGTTCATGAAGATCTTCGCCAGCAGCGGAAACCTCCAGGTCGGAAGGGCAAGGAAAAAATAGAAGAACCTCAAGGGAGAAAGGGTAAGGAAAAGGTGGAGGATTTTAAAAGCGAGGTGGCAAAGCAGGTGTGTGGAATTTGTCTGTCCGAAGAAAATAAAAGAAGAGTGAGGGGAGTACTAAATTGCTGTACTCATTATTTTTGTTTTGCTTGCATTATGGAGTGGGCAAAGGTGGAATCTCGCTGCCCTCTGTGTAAGCAGAGATTCACAACAATCAGTAAACCAGCACGTTCAACAGGGATTGACTTAAGAGAAGTGGTGATACATGTCCCGGAAAGAGACCAGGTTTATCAGCCCTCTGAAGAAGAACTCAGGAGTTATATTGATCCATATGAACACGTTATTTGTTCTGAGTGCCATCAAGGTGGAGATGATGGCCTCATGTTATTGTGTGATATCTGTGATTCTCCAGCACACACATACTGCGTTGGTTTGGGGCAGGAAGTTCCTGAAGGCAATTGGTACTGCGATGGTTGTAGACCAGTTGCTTTAGGATCTTTAGGCTCTGAAGTTCAAGAACGTGTGGCTGAACAAAGGGTGACAATCCAGAGCCTGCCTGTTAGACCACCTGGCATTCATGTACGAGAAAGTATAGACCTCAACTCGATGTCTTCACCCCGTGTAGCTTTTACTCAAGGATTCGGGCATCTCCCGTCTTCTAGATTTACTGGCAGAAGTGTTGAAGGAGCTTCTCCTGTATCTGGAGGGGCACCAACTTTATCAGAAAGGCGCTGGATACACCGTCAAATTCAGCAGCTTCTTACAATAGACAGATTGACTTCCACAACTGGCAGAACTAATGCTATTCCGGCTACCAGTTCAACTAGTAATTTGTACAACTGTCAAATCGGTCAAAGTAGAGAAATTGCATCTGAACATGCAATGACTCAGGATGTGGGAACATCATACCATACATTCTTTGAGGAGACATTAGGTAGTAATACCTCTCCATTGATACAGAATGGGGCATTATGGCCTGGACTTGTGGGGTCAACACCGGTATTGGATTGCGAGCAAATCCATCAGTTCAGTAGATCAAATATTGTCCTTGATGATAGCTTGTCGCCTGGGGTCAGAGAGGAAAGTAATAACTTTCACAATGCAAAGGAGCAGTTGCAGTCAATGGTTAAAAATCACCTGAAGAGCTTGTCTCAGAATATTGATTTAGGCCACAACACTATCAAGGACATTGCAAGGAGTTCCATGCACACAATACTTGCAGCTTGTGGTCTTGAGCACACGAAGAGTGAGGTTTGCTTTGTGCCTCCCCCAGCCGTCTGTTCGCATATCGAGCTAAATGCCGGTGGGAAAACGAGTCTAATTAAAGGTTGCTGCTCATCTTGCTTTGATTCTTTTGTAGGAGATGTGGTGAAAAGGATTTTGGACACAAGATTTTCTTCACAGTGGTTAAGATTAGGGCTTTAG 2817 0.4455 MGRGGKVGKKGNSRKRDWSNKASSDDSDEDYVVSDEEYSSSLDGLASEEEGEEECPRVRNFSRSKAKNGICGRQRNVSKTSRKRGKITYEDEEDEEGEAGEEEEKEEAEKDEDEEEVQEEEDDEYKEEDDEEYVEEEEEKEEDEDEDEENEGIGNFSRSKARNGVYGQPKNASKTSTKRRGITFAEPLEEDEEEKEKDEGDMKDKEEEGDKNDKEEEENDRYKEEEENESEKVVEEGKKDKEEEEYDEEKVEMEGDGGEEEETGDEWKEEEDGDADEEDEDFDCDDDDEFTPEEDGYSDEEEEEMRGRGKNNNGMTNRKKVSQKRASVVSTRGRKKRSSRAAKRQSRNKKRRNGRIRKTVKSGDEDDFIDNGPTIRTASRDKRGRKRRRVVRSDSDCVSSGSPDVEYTISEEEREQVREANELCGGSRINLRSSSLLIKNEEDGVHEDLRQQRKPPGRKGKEKIEEPQGRKGKEKVEDFKSEVAKQVCGICLSEENKRRVRGVLNCCTHYFCFACIMEWAKVESRCPLCKQRFTTISKPARSTGIDLREVVIHVPERDQVYQPSEEELRSYIDPYEHVICSECHQGGDDGLMLLCDICDSPAHTYCVGLGQEVPEGNWYCDGCRPVALGSLGSEVQERVAEQRVTIQSLPVRPPGIHVRESIDLNSMSSPRVAFTQGFGHLPSSRFTGRSVEGASPVSGGAPTLSERRWIHRQIQQLLTIDRLTSTTGRTNAIPATSSTSNLYNCQIGQSREIASEHAMTQDVGTSYHTFFEETLGSNTSPLIQNGALWPGLVGSTPVLDCEQIHQFSRSNIVLDDSLSPGVREESNNFHNAKEQLQSMVKNHLKSLSQNIDLGHNTIKDIARSSMHTILAACGLEHTKSEVCFVPPPAVCSHIELNAGGKTSLIKGCCSSCFDSFVGDVVKRILDTRFSSQWLRLGL* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1081 938 Coils Coil 89 146 - -
Aev09g1081 938 PANTHER F18C1.6 PROTEIN 1 121 - -
Aev09g1081 938 Pfam PHD-finger 579 625 IPR019787 -
Aev09g1081 938 SUPERFAMILY FYVE/PHD zinc finger 551 625 IPR011011 -
Aev09g1081 938 ProSiteProfiles Zinc finger RING-type profile. 488 530 IPR001841 -
Aev09g1081 938 MobiDBLite consensus disorder prediction 442 476 - -
Aev09g1081 938 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 566 648 IPR013083 -
Aev09g1081 938 Coils Coil 188 243 - -
Aev09g1081 938 MobiDBLite consensus disorder prediction 358 379 - -
Aev09g1081 938 MobiDBLite consensus disorder prediction 225 245 - -
Aev09g1081 938 SMART ring_2 488 529 IPR001841 -
Aev09g1081 938 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 465 549 IPR013083 -
Aev09g1081 938 MobiDBLite consensus disorder prediction 310 328 - -
Aev09g1081 938 CDD RING-HC_Topors 488 530 - -
Aev09g1081 938 SMART PHD_3 579 624 IPR001965 -
Aev09g1081 938 MobiDBLite consensus disorder prediction 11 28 - -
Aev09g1081 938 MobiDBLite consensus disorder prediction 329 357 - -
Aev09g1081 938 MobiDBLite consensus disorder prediction 161 180 - -
Aev09g1081 938 ProSiteProfiles Zinc finger PHD-type profile. 577 626 IPR019787 -
Aev09g1081 938 MobiDBLite consensus disorder prediction 91 151 - -
Aev09g1081 938 PANTHER F18C1.6 PROTEIN 216 927 - -
Aev09g1081 938 MobiDBLite consensus disorder prediction 246 301 - -
Aev09g1081 938 PANTHER F18C1.6 PROTEIN 1 121 - -
Aev09g1081 938 PANTHER F18C1.6 PROTEIN 216 927 - -
Aev09g1081 938 ProSitePatterns Zinc finger RING-type signature. 507 516 IPR017907 -
Aev09g1081 938 Pfam Ring finger domain 487 530 IPR001841 -
Aev09g1081 938 MobiDBLite consensus disorder prediction 198 218 - -
Aev09g1081 938 Coils Coil 822 842 - -
Aev09g1081 938 MobiDBLite consensus disorder prediction 29 50 - -
Aev09g1081 938 SUPERFAMILY RING/U-box 487 536 - -
Aev09g1081 938 MobiDBLite consensus disorder prediction 1 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1081 Aev-Chr9 12635479 12638728 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1081 488 533 C3H Transcription Factor Family AT2G39100 43.478 2.43e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev09g1081 PHD 3.4e-09 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1081 - - gmx:100791422 959.903