Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1035 ATGAGTAAAGAAAGTGCACATGCGAAGAAGAGAATCATGGTCATTACTATATCCACCGTCGTACTGGTGGCTATGATCGTCGCTGCCACGATTAGCGTCAGCGTCTCGCAATTTGGTTCCAACAGCAATCGGATGAATAAAAATAATGACCACATGACTTCCTCTGTAAAAGCTGTGAAAGCCCTATGCCAGCCAACTGATTACAAGAAGGAATGCGAGGAAAGTCTCCGATCAGAAGCCGCAAACACCACAGAACCAAGAGAACTCATCAAAATCGCATTCAACGCCACCATAAAAAAGATTACCTTGGGGCTCAATAAAAGTCATGTCTTGCAAGAGGCAGAGAATGACCCTAGAGCAAAGTCAGCACTTGACACGTGTAAACAACTCATGAACCTCTCCATTGCCGAGTTTAATAGGTCGTTGGAGAGAATGGGAGATTTTGATCTCAACAACCTTGACAACATCCTCACGAGCTTGAAGGTTTGGCTTAGTGGTGCAATAACATATCAAGAGACCTGTTTGGACGGTTTCAAAAACACGACGAGTGAGGCTGGGAAGAAGATGGAGGAAGCATTAACAAATGCAATGCGAATGAGTAGCAATGCACTTGCGATTATAACTGAACTCGCAAATGCGGTGTCAGATTTGAATGAGACGAAAGAAGATCGCCGTCTTTTTGAAAATCACTACAAGAAACTTACAGATTATCGAAACAACAAGGAAGTTGAGTTTCCATCTTGGGTTGATGGTGCTGGAGTACGTAGGCTCCTTAATACCAACCCGAAAAAACTGAAGCCCAATGTAGTTGTGGCAAAAGATGGTAGTGGAAAATTCAAGAGCATTAAGGAGGCGTTGAAGCATGTGCCGATGAATAACAATAAGCCCTTCGTGATATTCATCAAGAAGGGCATTTACAAAGAGTATATTGAGGTTACAAGGGAAATGACCCATGTGGTGTTGGTTGGTGAAGGGGGCAAAAAGACCCGAGTCACGGGCAATAAAAACTTTGCGGATGGTGTTACCACTTATAAAAGCTCTACTGTAGTTATTCAAGGAGATTACTTTGTGGCCATCAATATGGGTTTTGAGAACTCTGCTGGTCCACAAAAGTTTCAAGCTGTAGCCTTAAGGGTCCAAGCAGACAAGTCCATCTTCTACAGGTGCTCAATTGATGGTTACCAAGACACACTTTACGCACACACAATGCGTCAATTCTATCGAGATTGCACTATATCTGGCACCATTGACTTTATCTTCGGGGACGCAATTGCCGTTTTCCAAAACTGTACTTTCGTGGTGCGAAAGCCACTAGAAAACCAACAATGCATTGTAACAGCACAAGGTAGAAAAGACAGACACCAACCATCAGGAATAGTTATCCACGGTGGCTCCATTGTATCTGATCCAAAGTACCATAAAGCAAAGTTTGATAGCAAGGCCTACTTAGCACGTCCATGGAAGAATTACTCAAGAACAATTTTTATGGAAACATTCATCGATGATTTGATTCAGCCTGATGGATATATGCCATGGTTAGGGAAAGATGGCCCTACAGGGATGAACACTTGCTTCTATGCAGAGTACAAAAACACTGGCCCCGGTTCAAACAAATCGAAGCGTGTGAAATGGCATGGGATTAAGAAACTTGATGAGAAATCCGCAAGTAAATTCTTTCCATCCAATTTCTTTCACGGAGATCAATGGATTAAGGTTACTAAGGTTCCTTACTCCTCAGATGAGATCTCCACCAAGCATCACTAA 1764 0.4274 MSKESAHAKKRIMVITISTVVLVAMIVAATISVSVSQFGSNSNRMNKNNDHMTSSVKAVKALCQPTDYKKECEESLRSEAANTTEPRELIKIAFNATIKKITLGLNKSHVLQEAENDPRAKSALDTCKQLMNLSIAEFNRSLERMGDFDLNNLDNILTSLKVWLSGAITYQETCLDGFKNTTSEAGKKMEEALTNAMRMSSNALAIITELANAVSDLNETKEDRRLFENHYKKLTDYRNNKEVEFPSWVDGAGVRRLLNTNPKKLKPNVVVAKDGSGKFKSIKEALKHVPMNNNKPFVIFIKKGIYKEYIEVTREMTHVVLVGEGGKKTRVTGNKNFADGVTTYKSSTVVIQGDYFVAINMGFENSAGPQKFQAVALRVQADKSIFYRCSIDGYQDTLYAHTMRQFYRDCTISGTIDFIFGDAIAVFQNCTFVVRKPLENQQCIVTAQGRKDRHQPSGIVIHGGSIVSDPKYHKAKFDSKAYLARPWKNYSRTIFMETFIDDLIQPDGYMPWLGKDGPTGMNTCFYAEYKNTGPGSNKSKRVKWHGIKKLDEKSASKFFPSNFFHGDQWIKVTKVPYSSDEISTKHH* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1035 587 CDD PMEI-like_3 61 212 - -
Aev09g1035 587 Pfam Pectinesterase 268 567 IPR000070 GO:0030599|GO:0042545
Aev09g1035 587 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
Aev09g1035 587 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 210 IPR035513 -
Aev09g1035 587 PANTHER PECTINESTERASE 11 582 - -
Aev09g1035 587 SMART PMEI_2 54 206 IPR006501 GO:0004857
Aev09g1035 587 Gene3D - 262 581 IPR012334 -
Aev09g1035 587 ProSitePatterns Pectinesterase signature 1. 293 312 IPR018040 -
Aev09g1035 587 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 212 IPR035513 -
Aev09g1035 587 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Aev09g1035 587 TIGRFAM PME_inhib: pectinesterase inhibitor domain 23 210 IPR006501 GO:0004857
Aev09g1035 587 SUPERFAMILY Pectin lyase-like 266 579 IPR011050 -
Aev09g1035 587 PANTHER PECTINESTERASE 11 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1035 Aev-Chr9 11800590 11803226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1035 9 579 Carbohydrate Esterase AT3G05610 49.826 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1035 K01051 - gmx:100794799 802.357