Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1023 ATGTCAGGAGAAGATGCACAGAAGAGAAGAAGAATTGCCGTCATTGGCATCTCCAGCATCTTGCTGGTTGCTATGGTTGTCGCTGCCACCGTCAGCGTAACCAGCATGAAAAATAATAAAGATGAAGAGAACGACCAACACATTACTTCTACCGTTAAAGCTGTGAGTGCCATTTGCTCCCCAACACAATACAAGGAAGAATGTGAGGAAAGTATCATGGCAGAAGCCCAAGCCACTAATACCACAAACCCTAAAGACCTCATCAAAATCGCCTTCAACGCGACAATCAAACAGATCACCGAAAAGGTGAAGGAGGCCGAACTGATGCAAGAGATTGAGAAGGAGCCAAGGGCAAAGGCCGCGCTCGACACGTGCAAGCAGCTTATGAACTTGTCCATTGGTGAGTTCATGAAGTCAGTTGACACAATCAGCGAGTTCAGCTTCACCAACATGGATGAAATCTTTGAGAGCTTGAAGGTTTGGCTAAGCAGTACCATTACATACCAAGACACTTGTTTGGATGCATTCGAGAACACGACCAGTGATGCTGGCAAAAAGATGAAGGAATACTTGACAAACACCATGCACATGAGCAGCAATGCACTCACCATGGTAACCGACATGGCCGATGCCGTGGACAACTGGAATGTGACAAAGATGTTCGGTGGTCGTCGTCTCCTTGAGAAGAATGATGATGAATTTCCCTCATGGGCTGGTGCTGGTGTTCGTAGGCTCCTCCGCTCATACCCAATCCCACAAACGCCTAATGTTACTGTGGCTCTTGATGGCACTGGAGACTTCAAAAACATCACCGAGGCATTGCAACTTGTGCCACGTAATAACAGGAGACCCTTTGTTATCTTCATCAAGGCTGGTATTTACCACGAGTACGTTGAAGTTCGCAGAGACATGCCCCACGTAGTGTTTGTCGGTGAAGGAGGCAACGTGACAAGAATTACCGGTAACAAAAACTTCATTGATGGTATTAACACCTACAGAACTGCCACTGTTGCTATTATGGGAGAACACTTTGCTGCTGTCAATATTGGATTTGAGAACTCAGCAGGTGCTGAAAAACATCAGGCAGTTGCCGTAAGGGTTCAATCAGACAAGTCTATCTTCTACAAGTGCACATTTGATGGTTACCAGGACACACTCTATGCCCACACCATGCGTCAATTCTATAGGGATTGCACCATCTCGGGCACCATCGACTTTATCTTCGGTGACTCTCTTTCAGTTTTCCAGAACTGCACTTTCTTGGTCCGCAAGCCATTGAAAAACCAGAATAACATTGTGACTGCACAAGGCAGGAAGGATGTCCGTCAACCAACCGGAATAGTCATCCAAGGTGGTTCCATCATTGCTGACCCAGACTTCTACTCAACGAGGTTTGACCACAAAAACTTCCTTGCACGTCCATGGAAGAATTTCTCAAGGACTGTCTTCGAGGATGTCTTCATTGATGATTTGATTAATCCTGAGGGTTACATGCCTTGGGAAGGACCAACTGGACCAATAAACATGAACACTTGTTTTTATGCTGAGTACCACAACTACGGTCCTGGCTCAGAAAAATCCAAGCGTGTGAAATGGTCTGGTGTATGGAACCTCAACTCTAAGGCTGCAAAATGGTTCTCTCCAGAAAAATTCTTCCATGGTGATGATTGGATTGAGGCTACTAAAATTCCTTACTTCCCTACCGTTCCTGAACACAAGAAACACAAAGACACAAATCGCCATTGGTGA 1749 0.4568 MSGEDAQKRRRIAVIGISSILLVAMVVAATVSVTSMKNNKDEENDQHITSTVKAVSAICSPTQYKEECEESIMAEAQATNTTNPKDLIKIAFNATIKQITEKVKEAELMQEIEKEPRAKAALDTCKQLMNLSIGEFMKSVDTISEFSFTNMDEIFESLKVWLSSTITYQDTCLDAFENTTSDAGKKMKEYLTNTMHMSSNALTMVTDMADAVDNWNVTKMFGGRRLLEKNDDEFPSWAGAGVRRLLRSYPIPQTPNVTVALDGTGDFKNITEALQLVPRNNRRPFVIFIKAGIYHEYVEVRRDMPHVVFVGEGGNVTRITGNKNFIDGINTYRTATVAIMGEHFAAVNIGFENSAGAEKHQAVAVRVQSDKSIFYKCTFDGYQDTLYAHTMRQFYRDCTISGTIDFIFGDSLSVFQNCTFLVRKPLKNQNNIVTAQGRKDVRQPTGIVIQGGSIIADPDFYSTRFDHKNFLARPWKNFSRTVFEDVFIDDLINPEGYMPWEGPTGPINMNTCFYAEYHNYGPGSEKSKRVKWSGVWNLNSKAAKWFSPEKFFHGDDWIEATKIPYFPTVPEHKKHKDTNRHW* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1023 582 TIGRFAM PME_inhib: pectinesterase inhibitor domain 21 206 IPR006501 GO:0004857
Aev09g1023 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 209 IPR035513 -
Aev09g1023 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 208 IPR035513 -
Aev09g1023 582 PANTHER PECTINESTERASE 11 569 - -
Aev09g1023 582 Pfam Pectinesterase 256 555 IPR000070 GO:0030599|GO:0042545
Aev09g1023 582 Pfam Plant invertase/pectin methylesterase inhibitor 54 204 IPR006501 GO:0004857
Aev09g1023 582 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Aev09g1023 582 SUPERFAMILY Pectin lyase-like 254 567 IPR011050 -
Aev09g1023 582 CDD PMEI-like_3 57 209 - -
Aev09g1023 582 Gene3D - 253 569 IPR012334 -
Aev09g1023 582 SMART PMEI_2 50 204 IPR006501 GO:0004857
Aev09g1023 582 PANTHER PECTINESTERASE 11 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1023 Aev-Chr9 11564971 11566822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1023 4 565 Carbohydrate Esterase AT3G05610 46.631 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1023 K01051 - gmx:100815272 798.505