Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1016 ATGGGGATCGATCTTAAAGCCGGAGGTAAGAGCAAGAAGACGAAAAGGACAGCACCCAAGTCCAATGATATCTACCTTAAGCTCTTGGTCAAGCTTTACCGCTTCCTTGTGAGGAGAACTGGCAGCAAGTTCAATGCTGTAATACTCAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCACTATCTTTGTCAAGGTTGATTAAGTATACCAAGGGCAAGGAAGGTAAGATTGCTGTGGTGGTTGGGACTATCACTGATGATATTCGTGCATATGAAGTTCCGCCATTGAAAGTTACAGCACTCAGGTTTACTGAGACTGCACGTGCAAGAATAGAGAAGGCCGGTGGTGAATGTTTGACATTTGATCAATTGGCTCTTAGGGCCCCTCTGGGACAGAACACGGTCCTTCTTAGAGGTCCAAAGAATGCTCGTGAAGCTGTGAAGCATTTCGGTCCGGCCCCTGGTGTGCCACACAGCCACACGAAGCCTTATGTGCGATCAAAGGGAAGGAAGTTCGAGAGGGCTAGAGGAAGGAGGAACAGCAGAGGATTTAGGGTTTGA 564 0.477 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEGKIAVVVGTITDDIRAYEVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1016 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Aev09g1016 187 MobiDBLite consensus disorder prediction 151 187 - -
Aev09g1016 187 Gene3D - 1 187 - -
Aev09g1016 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Aev09g1016 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Aev09g1016 187 MobiDBLite consensus disorder prediction 164 187 - -
Aev09g1016 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1016 Aev-Chr9 11466401 11468551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1016 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.570 8.72e-105 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1016 K02883 - gmx:100791657 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1016 09 11466401 11468551 Aev09g1016 09 11466401 11468551 ECH
Aev06g0798 06 5434803 5436399 Aev09g1016 09 11466401 11468551 PCT