Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0975 ATGGATGGCAAAAACGTATCTTCCGATCAAGTAATTGCGGAAATGCTTGAAATGGGGTTTGAGTATTCCAACATTGTGGAAGCTATCAAAATAGTGGGTCCATCTATTCCCAGTGCTGTGGAGCATATCTTGAATGGTGATTCTGGTAGTAGTAGAGGTAGAACTAGCATCCAAGCATCCACTTCCACCTCCAAATTTCATGCTAATAATGATATGACTCTCAAAAAAAGAGCTTTGTCCTCGACCCGCCAAGTTCGGCAATCGAGGATATTAGACCATTTTCAACCTAATGATAATAACGTCACTGAGTGCAAGAACAAGGATGTGGCTGTTGTTGATCTAACAGGCAATGTGGATGAGCGGAATGAGCCTTTCTTTGAAATGGGTGTTGGTTCCAGTGTGATGCCGGGGCCGATTGTAGCTGATTTGTTGGAAGGTTTTGATGTTGCATCTGATTGGGAGAAGAGAGCTAGCAGTCTCTTGCAGAAGCATTTCGGGTTTTCGTCATTGAAGAGTTTTCAGAAAGAAGCTCTCGGTGCATGGGTGGCTCATAAGGACTGCCTTGTCCTGGCTGCAACAGGATCTGGGAAATCTCTGTGCTTTCAGGTTCCCTCATTGTTAACTGGGAAAGTGGTGATTGTGATTTCGCCCTTAATAAGCCTGATGCATGATCAGTGCTTAAAGCTAGCAAGACATGGAGTCAGTGCTTGCTTTCTTGGGTCTGGGCAACTTGACAGTACTGTCGAGCAGAAAGCAATGAGAGGCATGTACAGTATAATATATGTTTGCCCAGAGACAGTCCTAAGATTGATTAAACCACTGCAGAAGCTTGTGGAAGGTCGTGGTATTGCTTTATTCGCAATTGATGAGGTGCATTGTGTTTCTAAATGGGGTCATGATTTCCGACCTGACTACAGCCGACTATCTGTGCTGAGGGAAAATTTCAGTACAAGCAAGCTAAAATCCCTGAAATTTGATGTACCTCTGATGGCTTTGACAGCTACAGCTACACAAAGAGTTCGAGAAGACATTTTAAAATCACTGTGCATGTCAAAAGAAACGATTGTTGTGCTCACATCATTTTTTCGATCTAATTTACGCTTCATGGTAAAGCATAGTGGAACATCACCAGCTTCCTATGAGAAAGATTTTCATGAACTGATTGAAGTATACAGTAGAAAGCCAAATACTAGTGTAAATAAAAAGGCTTTCAGCTCAAAGGATTCAGATGATGTTTCCAGTAGCTCTGATACTAGTAGATTCTCTGACACAGATACTGTTTTTCCTTTTGATCTGGATAACAACCAAGATGATTATGGTGAAAATGTAATGCACTCAAGAAACACAGACAATTTTATAAAGGGAAAAGAATTGTCTGTTGAATTCCTGGAAAATGACAATGATGTTTGTCAAAGTGTTGATGACTGGGATGTTTCCTGCGGTGAGTTTTGTGTACAACCTCCTTTAAAGGAATGGGAGTTATCTGAGAAAATTGATCCACCCAAGGAACCAGAAGGAAGTCTCAAATTTCTTAAAGAACCTTTGGAACAAGGACCGACAATCATCTATGTACCAACCAGAAAAGAAACACTGAGGATTTCAAAGTATCTATGCAAGTTTGGCGTGAAGGCTGCTGCTTATAATGCAGGGTTGCCCAAATCGCACCTAAGAAGGGTTCACAAAGAGTTTCATGAAAATACTGTTGAGGTTGTTGTTGCAACAATAGCATTTGGCATGGGGATTGACAAACCAAATGTCAGAAGAATCATCCATTATGGTTGGCCGCAGAGTTTGGAAGCCTACTACCAAGAAGCTGGTCGGGCTGGTCGAGATGGGAAAATAGCAGATTGCATTCTATTTGCAAACCTAGCAAGAATCCCGTCACTTTTGCCAAGTCGTAGAAGTGAAGATCAGACAAAACAAGCATATATCATGCTGTCTGATTGTTTCAGATATGGCATGAATACTTCATCCTGTCGTGCAAAGGTGCTTGTGGAGTATTTCGGAGAGGATTTCAGTCATAAGAAATGTCTCTCATGTGATGTGTGTGTTGATGGACCACCTCAAAAGCAGAATATGGAAGAAGAGGCATGTACATTACTACAAACAATAGCTGCCCATCATGCAAATAGTTTTTCCATGGATTGCTCGTACGATGACGATATACATTTTGACTCCGGATATAGAAGACTTGAAGAGAGGTCATGTCTTAAGAAGCTTGTTGAAAGGATAAGGGAGCAGTCTCAAAAGTTTCAAACCACCGATATATTATGGTGGAGAGGTCTTGCTCGGATTTTGGAAGCTAAAGGGTACGTCAAAGAGGGAGATGAAAAGACCCATGTTCAGATAAAATATCCAGAGCCAACTAAATTGGGATTGGATTTTGTCAAGTCCACGAGTAAGCAAGCTTTCTATGCTTACCCTGAGGCAGATATGTTACTTGCAATGAAAACTGATAAACCAACGAAACCATATTCATCGTTCTCCGAATGGGGAAAAGGTTGGGCTGATCCCGAGATCCGTCGCCATCGCCTGGAAAGATTGCAACTCGACGGAAAGCCACGGAGGACGCAAAGTCCCAAAAAGCAACGAAAGAGAAAAGCCTATAAAGTGAAACCTGATCTGAGGACTTCTCGTGGGAGACTGGAAGCGAAACTCGCAAAATACAAGTGA 2673 0.4194 MDGKNVSSDQVIAEMLEMGFEYSNIVEAIKIVGPSIPSAVEHILNGDSGSSRGRTSIQASTSTSKFHANNDMTLKKRALSSTRQVRQSRILDHFQPNDNNVTECKNKDVAVVDLTGNVDERNEPFFEMGVGSSVMPGPIVADLLEGFDVASDWEKRASSLLQKHFGFSSLKSFQKEALGAWVAHKDCLVLAATGSGKSLCFQVPSLLTGKVVIVISPLISLMHDQCLKLARHGVSACFLGSGQLDSTVEQKAMRGMYSIIYVCPETVLRLIKPLQKLVEGRGIALFAIDEVHCVSKWGHDFRPDYSRLSVLRENFSTSKLKSLKFDVPLMALTATATQRVREDILKSLCMSKETIVVLTSFFRSNLRFMVKHSGTSPASYEKDFHELIEVYSRKPNTSVNKKAFSSKDSDDVSSSSDTSRFSDTDTVFPFDLDNNQDDYGENVMHSRNTDNFIKGKELSVEFLENDNDVCQSVDDWDVSCGEFCVQPPLKEWELSEKIDPPKEPEGSLKFLKEPLEQGPTIIYVPTRKETLRISKYLCKFGVKAAAYNAGLPKSHLRRVHKEFHENTVEVVVATIAFGMGIDKPNVRRIIHYGWPQSLEAYYQEAGRAGRDGKIADCILFANLARIPSLLPSRRSEDQTKQAYIMLSDCFRYGMNTSSCRAKVLVEYFGEDFSHKKCLSCDVCVDGPPQKQNMEEEACTLLQTIAAHHANSFSMDCSYDDDIHFDSGYRRLEERSCLKKLVERIREQSQKFQTTDILWWRGLARILEAKGYVKEGDEKTHVQIKYPEPTKLGLDFVKSTSKQAFYAYPEADMLLAMKTDKPTKPYSSFSEWGKGWADPEIRRHRLERLQLDGKPRRTQSPKKQRKRKAYKVKPDLRTSRGRLEAKLAKYK* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0975 890 SMART ultradead3 166 371 IPR014001 -
Aev09g0975 890 MobiDBLite consensus disorder prediction 846 890 - -
Aev09g0975 890 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Aev09g0975 890 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE SIM 1 879 - -
Aev09g0975 890 SUPERFAMILY UBA-like 8 46 IPR009060 GO:0005515
Aev09g0975 890 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 160 389 IPR004589 GO:0004386|GO:0006310
Aev09g0975 890 MobiDBLite consensus disorder prediction 873 890 - -
Aev09g0975 890 Pfam DEAD/DEAH box helicase 173 340 IPR011545 GO:0003676|GO:0005524
Aev09g0975 890 Gene3D - 624 805 IPR036388 -
Aev09g0975 890 MobiDBLite consensus disorder prediction 399 421 - -
Aev09g0975 890 Pfam Helicase conserved C-terminal domain 508 611 IPR001650 -
Aev09g0975 890 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 178 354 IPR014001 -
Aev09g0975 890 Pfam RecQ zinc-binding 633 683 IPR032284 -
Aev09g0975 890 SMART helicmild6 531 612 IPR001650 -
Aev09g0975 890 Gene3D - 494 620 IPR027417 -
Aev09g0975 890 MobiDBLite consensus disorder prediction 858 872 - -
Aev09g0975 890 Gene3D - 145 362 IPR027417 -
Aev09g0975 890 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 507 665 IPR001650 -
Aev09g0975 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 623 IPR027417 -
Aev09g0975 890 CDD DEXHc_RecQ 159 361 - -
Aev09g0975 890 PANTHER DNA HELICASE RECQ FAMILY MEMBER 1 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0975 Aev-Chr9 10889456 10896564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0975 503 621 Eukaryotic Initiation Factors Gene Family AT5G11170 27.731 9.37e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0975 K10900 - gmx:100793222 1239.17