LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev09g0905	ATGGAGGTAGCTACAAGCGGAGGACGACGCGCCAACACTGGTAGGGGAGGTCGAAGGACGAGGCGAAGACACACAAACACTGGTAGCGGAGGTCGAAGGGAAAAAAGAAGACGAAGAAGGATAGGAGAAAACATGGTGGCTGAAGCAGAACTCGTGTGTCAACAAAGCGTGGCTGTGTTGGATGTGAAGTATTTTCCCAACAAAGGAAGAATTGTTCACGAGATCGACGACGCAGCACCTACCATCACGCCTCCGAGTTTAGACCGAGTTCGGGATTCTGAGTCGGTCCCGGCCGAGTTACTCACTTCACAAGATGATGTTAGGTCTACTGACAGAATCTCAGATGCTGCTCTTGAATCTGCGGTTCTGCAATTTTTCCCCTGCATCCGATCTGGTAGTTTTGCCGACATTGGGCCTCGGAGATACATGGAAGATGAACACATAAGGATAGATGATTTGTCTTCTCACCTGGGATCACTGTACAACTTTCCCAAACCAAGTGCCTTTTATGGGGTCTTTGATGGCCACGGAGGACCCGAAGCTGCAGCTTATGTAAGAAAGAATGTTCTAAAATTCTTTTTCGAGGATGTGTGTTTCCCACAAACATCTGAAGTTGATAATATGTTTTTGGAAGAGGTAGAGGATTCCCTTAGGAAGGCATTTCTTTTGGCTGATTCAGCCTTGGCCGATGATTGCAGTGTGAACAGTTCATCAGGGACCACAGCCCTGACCGCTTTGATATTTGGGAGGCTTCTAATGGTGGCCAATGCTGGTGACTGCCGTGCAGTTCTCTGCCATAAAGGAGAGGCCATTGACATGTCTCAAGATCATAGGCCCATATACCCCTCGGAGCGGAGGCGAGTTGAACAATTGGGTGGTTACATAGATGATGGTTATCTTAATGGGGTTTTATCTGTTACTAGAGCACTAGGAGACTGGGACCTGAAGTTACCAAAGGGTACTCCCTCTCCTTTGATTGCAGAGCCTGAGTTCCGACAAGTGGTTCTAACCGAGGATGATGAATTCCTCATCATTGGATGTGATGGCATCTGGGATGTGATGTCAAGTCAGGATGCTGTTAGCCTCGTTCGCAGAGGCCTGAGGCGCCACGATGACCCAGAGCAGTGTGCAAGAGACCTTGTTATGGAGGCGTTACGCCTGAACACATTCGACAATCTCACTGTGATCATTGTATGCTTCTCTTCCATTGACCAAAGTGAGCCCTCACCATCTCCGCCTCGCCAACGGAAAATGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGGAGCTTGCTGGAAGGCAGTGCAAGCAACTGA	1326	0.4894	MEVATSGGRRANTGRGGRRTRRRHTNTGSGGRREKRRRRRIGENMVAEAELVCQQSVAVLDVKYFPNKGRIVHEIDDAAPTITPPSLDRVRDSESVPAELLTSQDDVRSTDRISDAALESAVLQFFPCIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLYNFPKPSAFYGVFDGHGGPEAAAYVRKNVLKFFFEDVCFPQTSEVDNMFLEEVEDSLRKAFLLADSALADDCSVNSSSGTTALTALIFGRLLMVANAGDCRAVLCHKGEAIDMSQDHRPIYPSERRRVEQLGGYIDDGYLNGVLSVTRALGDWDLKLPKGTPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMSSQDAVSLVRRGLRRHDDPEQCARDLVMEALRLNTFDNLTVIIVCFSSIDQSEPSPSPPRQRKMRCCSLSAEALCSLRSLLEGSASN*	442

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev09g0905	441	ProSitePatterns	PPM-type phosphatase domain signature.	169	177	IPR000222	GO:0043169
Aev09g0905	441	MobiDBLite	consensus disorder prediction	1	41	-	-
Aev09g0905	441	PANTHER	PROTEIN PHOSPHATASE 2C 49-RELATED	45	422	-	-
Aev09g0905	441	PANTHER	PROTEIN PHOSPHATASE 2C	45	422	IPR015655	GO:0004722\|GO:0006470
Aev09g0905	441	Gene3D	-	119	406	IPR036457	-
Aev09g0905	441	SUPERFAMILY	PP2C-like	124	402	IPR036457	-
Aev09g0905	441	SMART	PP2C_4	119	398	IPR001932	-
Aev09g0905	441	CDD	PP2Cc	129	400	IPR001932	-
Aev09g0905	441	ProSiteProfiles	PPM-type phosphatase domain profile.	130	400	IPR001932	-
Aev09g0905	441	Pfam	Protein phosphatase 2C	140	392	IPR001932	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev09g0905	Aev-Chr9	9711156	9716750	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev09g0905	143	437	PP2C-type Phosphatase Gene Family	AT3G62260	71.284	3.06e-154	437

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev09g0905	K14803		-	gmx:100819791	702.59

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev09g0905	09	9711156	9716750	Aev09g0905	09	9711156	9716750	ECH

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