Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0892 ATGTCAAACATCACTAGTTGTGATAGTGGGAGCCTCTCAACAGAGAACACCATAGAAGATAGAGTTAAACAACAATCAGATATAGTTATTGGTCAGTTCAATAGTCCACATTCTCACACTTCAATAACAAATAATAATAGCAATGGTTCCAACAACACTAATCCACAGCCACAACCTCCACCTGTTAAGAAGAAAAGGAGCCTTCCAGGAAATCCAGATCCGAGTGCTGAAGTCATAGCTCTATCTCCAACCACACTAATGGCGACAAACAGGTTCATATGCGAGATATGCAAGAAAGGGTTCCAAAGAGACCAGAACCTTCAATTGCACCGTCGAGGCCATAACTTGCCATGGAAGCTGAAGCAACGAACAAGCTCAGAGATTAGGAAGCGCGTTTATGTGTGTCCTGAGCCCTCATGTGTCCACCACAACCCTGCAAGAGCACTAGGTGACCTCACGGGCATCAAAAAGCACTTTTGCAGGAAGCACGGCGAGAAGAAGTGGAAATGTGATAAGTGCTCCAAGAAGTACGCTGTCCAGTCTGACTGGAAGGCACATTCAAAGATATGCGGTACAAGGGAATACAAATGTGATTGTGGCACCATCTTTTCCAGAAGAGATAGCTTGATTACACACAGAGCATTCTGTGAGGCACTGGCAGAGGAGAAGAACAAAGTGAAGGAAGAATTAGGAGCTTTGTCAAAGATAAGCTCAAACCTGCAATGCCAACCAAATATGCCAAACCTCATACTTCCTTCACTACCAACAATAATCAACACCAACACCAACCAGCATCCTCTATCACTCGCTCACGGCCTCATGTTCCCAAGAACCCTTTCATCACCACCCTCAAACGCCCTTCACTTGGCTGCTGCTGGCTCATCATCATCATCACTACACATGTCAGCAACGGCACTGCTTCAGAAAGCAGCGCAAATGGGAGCAACCGTGAGTAGTAACAAGGACAATAATAATAATAATAGCAGCGAGGAAAAGGGTTGTTATGTTACAACAACAACAACAACAACCATGGCCCCACCATCATTTGGTGGAATAGTGCAACAGCAGAATATTATGCATGGCTCCTCATTCATGCAGCAAGACATTATTATGTCATCATCTCATCATCAATTTGGATTGAGTGGAGGAATGAATGGGGTGGACATGTTTAATGCTATATTGGATCAGAGCAAGGGAAGTGGTGGGGGGGATGTGATGACTTTGGACTTGTTGGGAATAGGAGGTGGTGGAGGAGGGAGTTTCTATGGAGGGGGTCATCAACAACAACAAGGAGGAGAGATCAGTATTAATAATGCTGCAAGAGATAATCATGATCAGATTTGGAGGAATTGGTCTGCCAAGAATGCCGCCTTTGAATCATTTTCAGCAACAAGCAGCTAG 1401 0.4461 MSNITSCDSGSLSTENTIEDRVKQQSDIVIGQFNSPHSHTSITNNNSNGSNNTNPQPQPPPVKKKRSLPGNPDPSAEVIALSPTTLMATNRFICEICKKGFQRDQNLQLHRRGHNLPWKLKQRTSSEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSLITHRAFCEALAEEKNKVKEELGALSKISSNLQCQPNMPNLILPSLPTIINTNTNQHPLSLAHGLMFPRTLSSPPSNALHLAAAGSSSSSLHMSATALLQKAAQMGATVSSNKDNNNNNSSEEKGCYVTTTTTTTMAPPSFGGIVQQQNIMHGSSFMQQDIIMSSSHHQFGLSGGMNGVDMFNAILDQSKGSGGGDVMTLDLLGIGGGGGGSFYGGGHQQQQGGEISINNAARDNHDQIWRNWSAKNAAFESFSATSS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0892 466 MobiDBLite consensus disorder prediction 1 19 - -
Aev09g0892 466 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 30 415 - -
Aev09g0892 466 Coils Coil 216 236 - -
Aev09g0892 466 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 114 IPR013087 -
Aev09g0892 466 Gene3D Classic Zinc Finger 147 227 - -
Aev09g0892 466 MobiDBLite consensus disorder prediction 27 53 - -
Aev09g0892 466 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Aev09g0892 466 MobiDBLite consensus disorder prediction 1 76 - -
Aev09g0892 466 SMART c2h2final6 92 114 IPR013087 -
Aev09g0892 466 SMART c2h2final6 168 188 IPR013087 -
Aev09g0892 466 SMART c2h2final6 133 163 IPR013087 -
Aev09g0892 466 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 30 415 - -
Aev09g0892 466 SUPERFAMILY beta-beta-alpha zinc fingers 91 188 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0892 Aev-Chr9 9454516 9460476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0892 59 226 IDZ Gene Family AT1G03840 85.714 5.75e-108 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev09g0892 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0892 - - adu:107465334 514.227