Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0888 ATGGATCAAGCGCGATCATCTTCTGGCAACAACAACATCGGAGAGGACAATGTGGGAATCCCCGATGACCTGCGTTGCAAGAGGTCGGACGGCAAGCAGTGGCGGTGCACGGCGATGTCGATGCCGGACAAGACGGTTTGCGAGAAGCACTACATCCAGGCAAAGAAGAGGGCCGCGAATTCCGCCATGAGGGCCAATCTCAAGAAGGCCAAGAGGAAGTCTGGCGTCGGCGCCATTGAAGACTCCGATGGTGCTAAGAGTGACGACTTCGACCTCCCGCTCTCCTCTGCCATCAAGCACGGGGAGCACAGCTCTGGGGGCAGCAAGTTCTTGGATAAGGTGTCCAAGAACCAGTTCCGCTACGCCCCGGAGGGTAAGAGGGGTGCCTCGGCGGCGGGCGCTGTGCCGCCGAGGCCTAGTGATGATGATTCGGAGGAGGAGGAGGAAGAGGCGTTGTATGAGGAGAACTGGACTGGGTATGACTCGCCGGAGGAGCCGGCTGATTCGTCGAGGAAAAGAAGGAGCTTGGATGCCACTAATGCCACCACTGAGTATTCTGATGAGAGCTCAGACACCTCTGAGGATACTGGCGGGCATATTTGCCATCAGTGCCGGAGGAACAACAGAGACAGGGTGGTTACTTGGTGCCAGCGGTGTGGTCGGAGGGGATACTGTGATATCTGTATATCAACATGGTATTCAGACATTTCTTTGGATGAAATTCAGAGGATGTGTCCTGCATGCCGCGGTGTATGTAACTGTAAAGTTTGCTTACGTAGTGATAATTCAATAAAGGTTCGGATACGTGAAATACCTGTTGTAGATAAGTTACAGTATCTTCACTCGCTGCTGTCATCGGTGCTTCCTGTAGTAAAGCAGATCCATGGCGAACAGTGTTTTGAAGTTGAGCTTGAAAAGAAGTTGCGTGGTGCTGAAATAGATCTTACCAGGATAAAATTGGGTGCAGATGAACAGATGTGCTGCAACTTATGTAGGATACCTATCGCTGATTATCATCGACGCTGTCCAAGATGCTCATATGATTTGTGCCTTAATTGCTGTCGAAATCTTCGAGAAGCAAGTACAAATCCCCATAAAGAACCCCAAACGGAGCAAGCAAAAACTTATGACCTAAACATATTAAGCAAGGTTCCTCATTGGAGATCCAATGAGAATGGAAGTATTCCATGCCCCCCTAAAGAGTATGGTGGCTGTGGTTGTTCGCCATTAAACTTAAGCCGGATTTTCAAGATGAACTGGGTTGCAAAGTTAGTGAAAAATGTAGAGGAAATGGTTAGTGGCTGTAGAATTAATAATGGTGATGGTCCACCAGAAACTGAGTCAAATAGAGTTAGACTTTGCCAATGTTCTCATAGAGAGGCCAGTGATGATAATTATCTTTATTGTCCTGCATCTGAAGATCTCAAAACAGATGGGATTGGCAATTTTATAAAGTACTGGAAAACTGGTCAACCAATCATTGTTAAGCAAGTTTTTGATAGGTCAACCATTTTAAGCTGGGATCCAATGGTCATCTGGAGAGGGATTCTAGAGACAACAGATGAGAAAATGAAAGATGAAAACAGAATAGTTAAGGCCATAGACTGCTTAGATGGGTCTGAGATTGAGATTGAGCTTAGTCACTTCATGAGTGGATACTCTGAGGGGCGTATTCATGATAATGGTTGGCCACAATTATTGAAGTTGAAGGATTGGCCTTCGCCTACTGCATCTGAAGAATTTCTCTTGTACCAAAGACCTGAATTTATCAGCAAACTGCCTTTACTTCAGTATATTCACTGCAAGTGGGGACTTCTTAATGTTGCAGCTAAATTGCCTCATTACTCCTTGCAGAATGACGTAGGACCCAAGATCTATATATCTTATGGTATCAATGATGAACTTGGCAGGGGTGATTCAGTTACCAATCTCCATTTCAATATGCGTGACATGGTGTACCTTTTGGTCCATACTACTGAAGTAAAGCTGAAGGACTGGCAGAAAGCTAAAATTGAAACGATCCAAGAGTCATACGAGGATTTAGTGGTGAAGGAACCACGTGGAGACCAACAAATATCTTCAAGGGGGAGTTCGCCTGATTCATCATTTGGTACAGAAAGTAATGGGGTGAATCTGGATTCAAACCAGAGTAAGTTGATTATGGATCAAGAGTTTGAAAATCATTCTAGCTCTGAAGGGAATACTGTCAATAATGAACTTCAATTCCAACTAAATGGAGATATATCCGAGAAAACACATCCTGGAGTTCTTTGGGACGTCTTTCGTCGGCAGGATGTTCCAAAGTTGAATGAATATTTGAAAATGCATCAGAAGGAATTTAGGAAGCCGGATGATATCTTAAATGAATTTGTTACATGGCCTCTTCATGATGGAGCTATTTTTCTTGACAGACACCATAAAATAAAGTTGAAGGAAGAGTTTGGAGTGGAGCCATGGTCATTTGAACAGAATTTGGGGGAAGCTATCTTTGTTCCTGCAGGCTGCCCTTTCCAAGCGAGAAATGTTCAGTCGACTGTTCAGTTGGGGCTTGATTTCTTATCTCCGGAAAGCCTAGGGGAGGCCGTAAGATTGGCAGAGGAAGTCCGCTGTCTACCTAATGAACATGAAGCAAAGCTTCAAGTATTGGAGGTTGGGAAGATATCTCTTTATGCAGCAAGTTCAGCTATCAAAGAAGTTCAGAAACTTGTGCTTGACCCAAAACTTGGTGAACAGATCGGATATGGAGACCCTAATTTGACTGCAATGGTTTCTGAGAATTACGAGAAGATGGTTAAGCGAAGGCAGGTCACTTGTGCTTGA 2820 0.4489 MDQARSSSGNNNIGEDNVGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRANLKKAKRKSGVGAIEDSDGAKSDDFDLPLSSAIKHGEHSSGGSKFLDKVSKNQFRYAPEGKRGASAAGAVPPRPSDDDSEEEEEEALYEENWTGYDSPEEPADSSRKRRSLDATNATTEYSDESSDTSEDTGGHICHQCRRNNRDRVVTWCQRCGRRGYCDICISTWYSDISLDEIQRMCPACRGVCNCKVCLRSDNSIKVRIREIPVVDKLQYLHSLLSSVLPVVKQIHGEQCFEVELEKKLRGAEIDLTRIKLGADEQMCCNLCRIPIADYHRRCPRCSYDLCLNCCRNLREASTNPHKEPQTEQAKTYDLNILSKVPHWRSNENGSIPCPPKEYGGCGCSPLNLSRIFKMNWVAKLVKNVEEMVSGCRINNGDGPPETESNRVRLCQCSHREASDDNYLYCPASEDLKTDGIGNFIKYWKTGQPIIVKQVFDRSTILSWDPMVIWRGILETTDEKMKDENRIVKAIDCLDGSEIEIELSHFMSGYSEGRIHDNGWPQLLKLKDWPSPTASEEFLLYQRPEFISKLPLLQYIHCKWGLLNVAAKLPHYSLQNDVGPKIYISYGINDELGRGDSVTNLHFNMRDMVYLLVHTTEVKLKDWQKAKIETIQESYEDLVVKEPRGDQQISSRGSSPDSSFGTESNGVNLDSNQSKLIMDQEFENHSSSEGNTVNNELQFQLNGDISEKTHPGVLWDVFRRQDVPKLNEYLKMHQKEFRKPDDILNEFVTWPLHDGAIFLDRHHKIKLKEEFGVEPWSFEQNLGEAIFVPAGCPFQARNVQSTVQLGLDFLSPESLGEAVRLAEEVRCLPNEHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGEQIGYGDPNLTAMVSENYEKMVKRRQVTCA* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0888 939 MobiDBLite consensus disorder prediction 1 25 - -
Aev09g0888 939 MobiDBLite consensus disorder prediction 141 155 - -
Aev09g0888 939 MobiDBLite consensus disorder prediction 59 111 - -
Aev09g0888 939 MobiDBLite consensus disorder prediction 1 15 - -
Aev09g0888 939 MobiDBLite consensus disorder prediction 690 713 - -
Aev09g0888 939 ProSiteProfiles Zinc finger RING-type profile. 201 249 IPR001841 -
Aev09g0888 939 MobiDBLite consensus disorder prediction 123 198 - -
Aev09g0888 939 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 196 262 IPR018866 -
Aev09g0888 939 PANTHER JMJC DOMAIN PROTEIN JMJ24 13 928 - -
Aev09g0888 939 MobiDBLite consensus disorder prediction 685 713 - -
Aev09g0888 939 MobiDBLite consensus disorder prediction 73 96 - -
Aev09g0888 939 Gene3D Cupin 463 878 - -
Aev09g0888 939 ProSiteProfiles WRC domain profile. 20 64 IPR014977 -
Aev09g0888 939 Pfam JmjC domain, hydroxylase 755 848 IPR003347 -
Aev09g0888 939 ProSiteProfiles JmjC domain profile. 601 869 IPR003347 -
Aev09g0888 939 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 13 928 IPR045109 GO:0032454|GO:0033169
Aev09g0888 939 SMART cupin_9 582 869 IPR003347 -
Aev09g0888 939 Pfam WRC 21 61 IPR014977 -
Aev09g0888 939 SUPERFAMILY Clavaminate synthase-like 485 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0888 Aev-Chr9 9428750 9444294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0888 21 61 GRF Transcription Factor Family AT3G13960 46.341 2.98e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev09g0888 JmjC 2.4e-06 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0888 K15601 - gmx:100801287 1449.88