Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0847 ATGACCCCAGCACCCAAATCCCGTCGAAATGACGGAATTACCCCTCTCAGTTTCCTCTGTTTCTTCATCCTTCTCTCTTCATCACTCGCCGGAGCTCAATCCGACAGCAGCAACAATCAAAACGACCCAAACTACTACAATCGATTCAGCCCCTCGATGGCAATCATTGTCGTGATCCTAATCGCAGCACTCTTCCTAATGGGATTCTTCTCAATCTACATCCGCCACTGCTCTGACTCACCCTCCGCCAGCGCCCGCCACCTCGCCGCCGTTGCCACCGGCAGATCCCGCCGTGGCTCCAGAGGACTCGATCGCTCCGTCATCGACTCGTTCCCGACGCTAGAATACTCCGTCGTCAAAGTTCACAAGATCGGAAAGGGAGCTCTGGAGTGCGCTGTTTGTTTAAACGAGTTCGAGGACACCGAAACGCTGCGTTTGATCCCGAAGTGCGACCATGTTTTCCACCCTGAGTGCATCGACGAGTGGCTCTCGTCTCACACCACGTGTCCCGTTTGCAGAGCCAACCTCGTTCCCCAACCCGGCGAATCAATACACGGCGTTCCAGAATTCAACAATGACGACGAGGCCCAAAACGACGTCGTTGAGACGGAATGCGAAAATCCGGATGAGGGGATCGAGATCAGGGAGGCCAAGGAGGTTTCCACGGTCACACTCGACGGGGCATTCGCTGGTCCAGCCTGGGGACAATACGGAGAGGTTCACACTAAGATTGCCGCAGGAAGTGAGGAAGCAGATTCTGATGAACCCTGCATTGAACAGAGCGAGGAGTTTGGTGATGTTGCCGAGAGAAGGGAGTTCGAGGCGAGGGTACCGAACCGGTGGTGGTGA 849 0.5524 MTPAPKSRRNDGITPLSFLCFFILLSSSLAGAQSDSSNNQNDPNYYNRFSPSMAIIVVILIAALFLMGFFSIYIRHCSDSPSASARHLAAVATGRSRRGSRGLDRSVIDSFPTLEYSVVKVHKIGKGALECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLSSHTTCPVCRANLVPQPGESIHGVPEFNNDDEAQNDVVETECENPDEGIEIREAKEVSTVTLDGAFAGPAWGQYGEVHTKIAAGSEEADSDEPCIEQSEEFGDVAERREFEARVPNRWW* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0847 282 PANTHER RING FINGER DOMAIN-CONTAINING 19 216 - -
Aev09g0847 282 SMART ring_2 131 172 IPR001841 -
Aev09g0847 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 179 IPR013083 -
Aev09g0847 282 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
Aev09g0847 282 CDD RING-H2_EL5_like 130 173 - -
Aev09g0847 282 Pfam Ring finger domain 130 173 IPR001841 -
Aev09g0847 282 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6 19 216 - -
Aev09g0847 282 SUPERFAMILY RING/U-box 125 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0847 Aev-Chr9 8766753 8767705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0847 12 204 Rapid Response to Elicitors AT3G05200 56.000 1.11e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0847 K10664 - gmx:100810865 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0843 06 5723138 5724268 Aev09g0847 09 8766753 8767705 PCT