Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0680 ATGAATTTTGACTTTTCAGATTTAAATGATACAAGTGTTCAAGTTACTAATGAAGATTATAACATTCATCATACTCCTCATATTGGGATGGAATTCACCTCTATTCAAGATGCTAAATTGTACTACAAAGCATTTGCTAGGCAAGAGGGTTTTTCATTTCGTACTCGTTCAAGTAAGCCAAACTACCGTATTTATGTTTGCTCTAATGAAGGATATCACAAAATCAAGAGTAATACTAAAGAAGATGGCAATGAGATGACAAAGAAAAAAAGGAGATGCTCAACATCAAGAACAGGGTGCACTGCATCAATTACCGTTTCAAAAGCCAAAAAAGAAGATATGTGGTGCATTACTTCTTTTAATAATGATCATAATCATGTTATGGTTAGTCCACGAAGTGTGCCCCTTCTTAGGTGTCATAAAAAAATGAGTGCAGCTGCTAAAAGTCTTGTGGAAAAGTTTAATGAAGAAGGTCTACCTTCAGGAAAGTATGATAAAGCAGTTGATAGTCGTTATGAGAAAGAAAGGAAAGAAGATTTTGAATCCAGACATCGATTGCGAATATTGAGTATTGGATCGAAAATTGAAGAGCATGCAGCATCAATTTATACCAGAAATATTTTCCTGAAGTTTCAAGAAGAGCTTGCAAAGGTAAACAAATTTATGAAGGAAAAAATCGAGAAGAATGAGTCTCAATGCATCTACAAGGTATTTAGTTGTTTTGATTCTCGTGACTCATTTCTTGTTACAGTGGAGTTGGATTCGAAGATTGCCAAATGCACATGTCAGCTTTACGAATTCATGGGAATATTATGTCGCCACATCCTCGTCATTTTCCAAGCAAAAAATATTGTGCAAATTCCAAGTCATTACATTTTACATCGTTGGACCAAAGATGCTAATAGTGGAAATATATTTAATTTGTTTGAAAAGAGTTCAGCTGCACATGACAAACATGCCTCGGCTATTTTGCGCAATAGACATGTTCATCATCAAGCTAGCTTGTTGGCAGATCTTGCAGAGAAGTCTGAAGATATTTACACTTATATTGTTACAAAGTTAGAAGAAACATGCATAACAGCTACTAGAATGGAAGCTGAGATGGATAAAAGTGTGAATGTAGAGGTCATAGTTGCAAATTCAAGTTGTCAAGATAGAATGAATGCTCTACTCCAAAGTGAATCTTCTAAATGA 1194 0.3484 MNFDFSDLNDTSVQVTNEDYNIHHTPHIGMEFTSIQDAKLYYKAFARQEGFSFRTRSSKPNYRIYVCSNEGYHKIKSNTKEDGNEMTKKKRRCSTSRTGCTASITVSKAKKEDMWCITSFNNDHNHVMVSPRSVPLLRCHKKMSAAAKSLVEKFNEEGLPSGKYDKAVDSRYEKERKEDFESRHRLRILSIGSKIEEHAASIYTRNIFLKFQEELAKVNKFMKEKIEKNESQCIYKVFSCFDSRDSFLVTVELDSKIAKCTCQLYEFMGILCRHILVIFQAKNIVQIPSHYILHRWTKDANSGNIFNLFEKSSAAHDKHASAILRNRHVHHQASLLADLAEKSEDIYTYIVTKLEETCITATRMEAEMDKSVNVEVIVANSSCQDRMNALLQSESSK* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0680 397 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 163 360 IPR031052 GO:0006355
Aev09g0680 397 Pfam FAR1 DNA-binding domain 41 129 IPR004330 -
Aev09g0680 397 ProSiteProfiles Zinc finger SWIM-type profile. 247 283 IPR007527 GO:0008270
Aev09g0680 397 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 153 IPR031052 GO:0006355
Aev09g0680 397 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 15 153 - -
Aev09g0680 397 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 163 360 - -
Aev09g0680 397 Pfam SWIM zinc finger 248 283 IPR007527 GO:0008270
Aev09g0680 397 SMART 26again6 258 285 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0680 Aev-Chr9 6193917 6195953 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev09g0680 FAR1 1.7e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0680 - - qsu:112003602 219.55