Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0644 ATGGGAAGAAGTCCATGTTGTTCTAAGGAAGGATTGAACAAAGGAGCTTGGACAGCTATGGAGGACAAAATTCTGACTGAGTACATTAAGGTTCATGGCGAAGGGAAATGGAGACACCTCCCTAAAAGAGCTGGTCTAAAGAGATGTGGGAAAAGTTGCAGATTAAGATGGTTGAATTATCTAAGACCTGGGATTAAAAGAGGAAACATTACCAATGATGAAGAGGAGCTTATAATCCGCCTTCACAACCTTCTTGGAAACAGGAAACTTCAAAATTGCTCTATCATCACAAATTGTGCAAGAAGCTCATCAAACTCTGTCCAATATGACGATCCAAATAAGGCCTCTTGTGTGGTCCAAACTAAAGCCACAAGGTGGCCTAATAATAAGGTCACACTCACAAAGGAAATTCCCAAACAAAATGGCCAAATTAATGACAAAAAAATCAATAATGTCACTATTAATAACAACACCAAAATAATGATGAAAGGGTCATTTTCACCGGAGAGAAACAACAATATTACTATTGACCCATTGGATTTTATATCGGATTTTCAGGTGGATGGAAATCTCTTTTCGGAGCTTCTCAAGATGGATTTTCCTGATGCATCATCATTGTGTTTGGAAAATCATAATAATAATAATAATAAGATGTTGGAAGAAAGTGGTAATTTTCCTTGCACCTTTGATGATGATGCGAAAGGGCAGTTATTTCCAAAATCATCCAATGACTCTCACTACTTCCCTTGGGTTGGTGATTCATTGTATGATGATACAAATTTTGATTTTCCACCAATGGCAACTTTTATGGAGTCAGGATTTGATTGGCTTTGA 834 0.3729 MGRSPCCSKEGLNKGAWTAMEDKILTEYIKVHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPGIKRGNITNDEEELIIRLHNLLGNRKLQNCSIITNCARSSSNSVQYDDPNKASCVVQTKATRWPNNKVTLTKEIPKQNGQINDKKINNVTINNNTKIMMKGSFSPERNNNITIDPLDFISDFQVDGNLFSELLKMDFPDASSLCLENHNNNNNKMLEESGNFPCTFDDDAKGQLFPKSSNDSHYFPWVGDSLYDDTNFDFPPMATFMESGFDWL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0644 277 SMART sant 13 63 IPR001005 -
Aev09g0644 277 SMART sant 66 218 IPR001005 -
Aev09g0644 277 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev09g0644 277 CDD SANT 16 61 IPR001005 -
Aev09g0644 277 PANTHER TRANSCRIPTION FACTOR TT2 1 88 - -
Aev09g0644 277 SUPERFAMILY Homeodomain-like 15 88 IPR009057 -
Aev09g0644 277 Gene3D - 14 66 - -
Aev09g0644 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev09g0644 277 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev09g0644 277 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0644 Aev-Chr9 5760706 5766624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0644 1 88 MYB Transcription Factor Family AT2G16720 72.727 5.72e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev09g0644 Myb_DNA-binding 1.5e-13 CL0123