Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0642 ATGGGTAGACGACCCTGCTGTTCCAAAGAGATCAACAAAGGTGCTTGGTCTCGAGAAGAAGATCAAACCCTCTCCAAATATGTTGCCATTCATGGTGAAGGAAAATGGCAGAAGGTTGCTCATAATGCCGGTTTGAAGAGGTGCGGAAAGAGCTGCAGACAGAGATGGTTGAACTATCTCAAGCCTGGCATAAAGAGAGGTGACATCTCTGTGGATGAAGAGGATATGATCATAAGACTTCATCGTCTTCTTGGTAACAGATGGGCTCTAATAGCAAAGAGGCTACCAGGACGAACAGACAATGAAATCAAGAACTACTGGAACACCAATCTGTCAAAGAAGTTACAAAATCAACATCCACCATCATCATCATCAGGCTCATCACTAAATCACAAACACAATTACAATTACAATTTTGAAGAGGAGGAAAAAAGGAAGGAAATAATACATGTTGCACCGGAAGCTCCTAGGCCTAGGAGATTTATTAATTCTCTCCAATACAGTAAAATCTCAGACACCAATAATGGGTGTAGGAGTAGCTATAGTCCTAGTCCCTCAAATAAAATGGAGGGTAGTGATGAAGCTTCTCTAACTGATTTCCTCATTGATATTGATCAAAACCATCAATTGCTGATTGATGATTATGATGATTCCAACTCAAAGCTACCTCAAATTGAAGACCACAACAAGAGGGTAGGCTTAATAACCAACAGTTCAAGCTCATCACATTCTGATCATAACTGCCTCCTCTTATCTCAGAAATTTGACCCTTTGGAGACCCTTTTGGATGTTGAGCTCAAGAGGATGGCTTCCTTTCTTGGACTTGAAAATGAGTGA 837 0.4086 MGRRPCCSKEINKGAWSREEDQTLSKYVAIHGEGKWQKVAHNAGLKRCGKSCRQRWLNYLKPGIKRGDISVDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSKKLQNQHPPSSSSGSSLNHKHNYNYNFEEEEKRKEIIHVAPEAPRPRRFINSLQYSKISDTNNGCRSSYSPSPSNKMEGSDEASLTDFLIDIDQNHQLLIDDYDDSNSKLPQIEDHNKRVGLITNSSSSSHSDHNCLLLSQKFDPLETLLDVELKRMASFLGLENE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0642 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Aev09g0642 278 PANTHER MYB TRANSCRIPTION FACTOR 1 273 - -
Aev09g0642 278 MobiDBLite consensus disorder prediction 173 192 - -
Aev09g0642 278 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Aev09g0642 278 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Aev09g0642 278 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Aev09g0642 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Aev09g0642 278 SMART sant 12 62 IPR001005 -
Aev09g0642 278 SMART sant 65 113 IPR001005 -
Aev09g0642 278 CDD SANT 15 60 IPR001005 -
Aev09g0642 278 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Aev09g0642 278 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 273 - -
Aev09g0642 278 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Aev09g0642 278 Gene3D - 6 66 - -
Aev09g0642 278 CDD SANT 70 111 IPR001005 -
Aev09g0642 278 Gene3D - 70 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0642 Aev-Chr9 5727460 5730465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0642 1 115 MYB Transcription Factor Family AT2G16720 63.793 6.05e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev09g0642 Myb_DNA-binding 8.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0642 K09422 - gmx:547568 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0642 09 5727460 5730465 Aev09g0642 09 5727460 5730465 ECH