Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0639 ATGAGCAATTGGTTGGGGTTCTCTCTAACTCCACACTTGAGGATTGATGAAGAATTTGGAAGAGAAGATCAAGATGGTGGTGATGGTGGTGGTGGAGGAGGAGGAGGAAGCTATTCTCATCCTCATCACTTATCTGTTATGCCTTTGCGCTCTGATGGCTCTCTCTGTGTTTCTGACTCTTTTCGCCACTCTCAAGAATGGAGATATGAGAGTACAATAGGAGGAGGGAATTCAAATGAAGAAGGTCCAAAGCTTGAAGATTTCTTAGGTAGTTACTCAAATTCCCCACTTGCTGAGACCAAAGTCTTTTGCCAAGGAACCCAACAAGAACATGACCAAAACCAGCAAAACAATATTCCCAAGATCAATATGAATGTTGCCCCAAGATTTAGCACTAGCAGCAACAATGAGATTGAAACAGGGGATAATCATCATCATCATCATCATCATCATCTAACAAACCCATCTTCATTATTGCAATCTTTTCATGCATATAACAATGATAATAGCAATAGCAATAACAATAACCCAAATGCCCTTATCACAAGCAATGGAATGTACAAGACATGGTTGGCTCAAACTCATCAATTTTCTGATGGAAAGGCTGATTCTTCATCAGCAGAGGCAAATAATAATAATAATTGCAATTTCCAGTCCTTGTCTCTGACTATGAGCCCCAGTTTGCAAAATGGGGTGGGTCCAGTTGCAATTTGTCCTGTTCAGGTGGATGATGACACAAGAAAAAGGTCTTTGGCAAAATCTCAGGGTAGAGAACCTGTGCCTCGCAAATCTATTGATACTTTTGGGCAGAGAACATCACAATACCGTGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGCTGCAGAAAGGAAGGGCAAACAAGGAAAGGAAGACAGGGTGGTTATGATAAGGAAGAAAAAGCAGCAAGGGCTTATGACTTAGCTGCACTCAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTTTAAGCACTTATGAGAAGGAACTTGAAGAGATGAAGCACATGACCAGGCAAGAATTTGTCGCCAATTTAAGAAGGAAGAGCAGTGGATTTTCAAGAGGGGCTTCTGTGTATAGAGGGGTGACAAGGCACCATCAACATGGAAGATGGCAAGCTAGGATAGGAAGAGTTGCAGGAAACAAGGACTTGTACCTTGGTACATTTAGCACACAAGAAGAAGCTGCTGAAGCTTATGATATAGCAGCAATCAAGTTTAGGGGAACAAGTGCCGTAACCAACTTTGACATTAGTAGGTATGACGTGAAGAGGATTTGCTCAAGCTCAACTCTCATTGCCGGCGATCTCGCGAAACGGTCTCCTAAGGAATCATCGGCTCCGGCCACCACCGATGACTTCAATTCGTGTGGCTCTACCGCACCTTCTCAACCGACTCCTCTGGCTATAACTAATGGTGAACACTCTGATGAGTTGTCCAACATGGTGTGGAATGCCAGCAGTAATGATCAGTTGCCAAATGAGAGTGGGAACATCAACAATGCCGCCACCGAATCATCGACACGTCCGGTCGAGTCGAGCAACAAGACTGCGATGAACCCTGAGAGCCCCAAGTGTTCTGTGGGACTACCAAATGAATTTGGAGTCAATGGGGCAGAGTATGGAAATGGGTACTTCACCCTGCAGGGACCAAAATTTGATGAAGGGAACAATGAAAATGAGCACATGAACAATAGGCTTGGAAATTTGGGTTTGGTTAACCAAGTTCCTATGTTTGCCTTGTGGAATGAATGA 1797 0.4368 MSNWLGFSLTPHLRIDEEFGREDQDGGDGGGGGGGGSYSHPHHLSVMPLRSDGSLCVSDSFRHSQEWRYESTIGGGNSNEEGPKLEDFLGSYSNSPLAETKVFCQGTQQEHDQNQQNNIPKINMNVAPRFSTSSNNEIETGDNHHHHHHHHLTNPSSLLQSFHAYNNDNSNSNNNNPNALITSNGMYKTWLAQTHQFSDGKADSSSAEANNNNNCNFQSLSLTMSPSLQNGVGPVAICPVQVDDDTRKRSLAKSQGREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKRSPKESSAPATTDDFNSCGSTAPSQPTPLAITNGEHSDELSNMVWNASSNDQLPNESGNINNAATESSTRPVESSNKTAMNPESPKCSVGLPNEFGVNGAEYGNGYFTLQGPKFDEGNNENEHMNNRLGNLGLVNQVPMFALWNE* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0639 598 SUPERFAMILY DNA-binding domain 372 433 IPR016177 GO:0003677
Aev09g0639 598 MobiDBLite consensus disorder prediction 501 536 - -
Aev09g0639 598 CDD AP2 372 433 IPR001471 GO:0003700|GO:0006355
Aev09g0639 598 MobiDBLite consensus disorder prediction 131 156 - -
Aev09g0639 598 ProSiteProfiles AP2/ERF domain profile. 373 431 IPR001471 GO:0003700|GO:0006355
Aev09g0639 598 SUPERFAMILY DNA-binding domain 273 339 IPR016177 GO:0003677
Aev09g0639 598 Pfam AP2 domain 372 423 IPR001471 GO:0003700|GO:0006355
Aev09g0639 598 Pfam AP2 domain 274 329 IPR001471 GO:0003700|GO:0006355
Aev09g0639 598 Gene3D AP2/ERF domain 273 339 IPR036955 GO:0003700|GO:0006355
Aev09g0639 598 Gene3D AP2/ERF domain 373 433 IPR036955 GO:0003700|GO:0006355
Aev09g0639 598 ProSiteProfiles AP2/ERF domain profile. 274 337 IPR001471 GO:0003700|GO:0006355
Aev09g0639 598 MobiDBLite consensus disorder prediction 19 45 - -
Aev09g0639 598 PRINTS Ethylene responsive element binding protein signature 275 286 IPR001471 GO:0003700|GO:0006355
Aev09g0639 598 PRINTS Ethylene responsive element binding protein signature 413 433 IPR001471 GO:0003700|GO:0006355
Aev09g0639 598 MobiDBLite consensus disorder prediction 458 487 - -
Aev09g0639 598 MobiDBLite consensus disorder prediction 452 487 - -
Aev09g0639 598 CDD AP2 273 339 IPR001471 GO:0003700|GO:0006355
Aev09g0639 598 SMART rav1_2 373 437 IPR001471 GO:0003700|GO:0006355
Aev09g0639 598 SMART rav1_2 274 343 IPR001471 GO:0003700|GO:0006355
Aev09g0639 598 MobiDBLite consensus disorder prediction 501 540 - -
Aev09g0639 598 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 51 497 - -
Aev09g0639 598 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 51 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0639 Aev-Chr9 5698324 5704248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0639 1 461 AP2-EREBP Transcription Factor Family AT1G72570 50.415 1.30e-137 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aev09g0639 AP2 1.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0639 K09285 - gmx:100805489 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0639 09 5698324 5704248 Aev09g0639 09 5698324 5704248 ECH