Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0628 ATGTCCTCGCAGGAACAAGCTCTAGTGTCCCTTCTCTCCCGTCTAGCCCTTTCCTTCGACGGCGCCGTTTTGGGCCTCGCCTTAGCCTACGCCGCCCTCCGCTCCCACCTCAAGTACACCGCCTCCTCCTCCGCCCTCCGCAAGCTCCACTCCGCTCCATCCGTTTCCGTTGCTGACCTCCGCTCCCTCCTCGCTGACGACTCCACCTCTGACGCTGACGGCAATTCCGACGATGGCAAAATCGTTATTGTCCGCGGCACCGTCGACACCAAGTCCGCCGTCGACGGCAGCTGGAAAGCTTTGAGGCCCGGCGTCTTGGTCTCTCGCGAGTCCGGCGATAAAGCCGTCGTCCTTCAAAGGACTCAAACGTGTATATACAATGAGTGGAAGGGCTTATTTGGATGGACTTCTGATCTTCGAGCTATATTTGCAAGATCTTGGAGACAACAAGAGTCTACATTCCTCAGAAAGGTGCCTTTTGTTCTCATTGATGTTGGACGGCGCCCAAATACTGAATATGTTGTCGTCAACTTGGATGGATCAAGACATCCATTACCTCTAACAACAGTTTATCACAAATTGCAACCCATAAATGCTTCTCCTTACACTTTCTTGCAAGCACTTTTTGGGCATGAATATCCGGTTGGACTACTAGATGAAGAGAAAATTCTTCCTGTGGGGAAGGATATAACTGCAGTTGGCCTTTGCAATTTTAAAAATGGAATTGCTGAAATTAAGTCATGTAAAGACCTACCATATTTTCTGTCGGACTTGAGTAAAGATCAGATGATTGTAGATCTTTCCTTCAAAACCAAAATATTGTCTTGGGGTAGTATTCTTCTTTTTACATTCTCTCTTGGAATTCTTGGCTATTCAGTTGTAAGGAACTGGCATAAGTGGAAGCAGTGGAAACAACGGCGGGAGCGGCAGCAGCAGCAGCAAAGGCAAGCGGTGAGTGATGAAGTTGAACATCGAGCAGATGACGATAACGAAGACGTTCCAGACGGACAATTATGCGTTATATGCCTGATGAGAAGAAGACGCTCTGTTTTCATCCCCTGTGGGCATCTTGTGTGTTGCCAGGGGTGTGCCATATCAGTTGAACGTGAAGTGGCACCCAAGTGTCCAGTTTGTCGGCAGGAGATTCGAGATTCGGTGCGGATTTTTGAATCTTGA 1176 0.4864 MSSQEQALVSLLSRLALSFDGAVLGLALAYAALRSHLKYTASSSALRKLHSAPSVSVADLRSLLADDSTSDADGNSDDGKIVIVRGTVDTKSAVDGSWKALRPGVLVSRESGDKAVVLQRTQTCIYNEWKGLFGWTSDLRAIFARSWRQQESTFLRKVPFVLIDVGRRPNTEYVVVNLDGSRHPLPLTTVYHKLQPINASPYTFLQALFGHEYPVGLLDEEKILPVGKDITAVGLCNFKNGIAEIKSCKDLPYFLSDLSKDQMIVDLSFKTKILSWGSILLFTFSLGILGYSVVRNWHKWKQWKQRRERQQQQQRQAVSDEVEHRADDDNEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEREVAPKCPVCRQEIRDSVRIFES* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0628 391 Pfam E3 Ubiquitin ligase 142 288 IPR022170 GO:0004842|GO:0006996|GO:0016567
Aev09g0628 391 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SPL2 1 391 - -
Aev09g0628 391 ProSiteProfiles Zinc finger RING-type profile. 339 379 IPR001841 -
Aev09g0628 391 MobiDBLite consensus disorder prediction 311 330 - -
Aev09g0628 391 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SPL2 1 391 IPR044247 GO:0004842
Aev09g0628 391 SUPERFAMILY RING/U-box 330 384 - -
Aev09g0628 391 Pfam Zinc finger, C3HC4 type (RING finger) 337 384 - -
Aev09g0628 391 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 322 391 IPR013083 -
Aev09g0628 391 SMART ring_2 339 378 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0628 336 388 C3H Transcription Factor Family AT3G06140 39.623 1.55e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0628 K15688 - gmx:100800058 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0628 09 5585888 5592693 Aev09g0628 09 5585888 5592693 ECH