Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0620 ATGGAGAGAGAGTGGGAGAGAGAACGTCAACAGGAAAGGAGTCGTCAAGGAAATATAGAATCAGTATGGAGCAAGAGGTTGAACAAGCACTACACTAATGGATGCAGAGGGAGATACATGTTTCCAAGAGGGTGGATAAGGAAGGTTGGTGAGAGAAGGTTCACAAATAGAATGAGTAAGGAAAACAGTGCAAGGAATAGACCACTAGGAAGCAGAAGAGTTTCCATCTTTGTGGACAACATCCCATGGAACCTTGGTAAAAGGGGAATGTGGAACATCTTTCGAAAATTCGGATGGATACTAGATATTTACATCTCACAAAGACAAAGACCTGCGAGGAAGACAACCTTCGGATTTGTCAGATTCGACAGTAAAGAGGAAGCACACAACGCGATCAAGGGATCGAATGGTTGGGAAGTAGATGACACGAAGCTCACGTCTAAATGGGCTGAAGCCAAAGGACGGAAGTGGGAGAATGTTTGGAGGGTAAAGGGGATTCTAGAAGTTGAAGCAAATAAGACTGATCGTGAAAAAATGCAGGAATCTCAAAAGGAGGACATAGGATTGGAAGGAAATTCCAGTGCAGGAGACTCCGTCGACTTTATGGTTTCCAATGGAATGGTAAATGAGGATGCGGTCAACTGGTGCGGAAGGTGTGGTGTTATCAAAATGAAAGACGTGATGGATAGGGAAAGTTTTGATGAAACTGTGAAGGGCGAGATAGATGGAATATGTAGTATACGAGCCCTTGATGCACGTTTCATGCTAGTGGAATTTGTAAACAAAGACGTCATGATGGAAGGGGTGAAACGTCTAAGAGAGATGACAATTATTAGCGAAGCCAATCCATGGGAGGAAAGATCTTACTGTGAATTAAGAAGTGCAACAGTCAGATGTTTAGGGTTGCCCATTCATGGTTGGGCTAAGGAAAACTTCAGAACCTTAATGAAACCTTGGGGAACCTTTGTAAGATTCCGGATCGATGATGAATTCAAGTCTGTAAAACTCATCATTGAAACTACGAATCTTGAGGAAATCAAAGGATGGATCAACATTGAACTGGGAGAGAAGATCTATAAGATCCGAATTGTGGAGGTTACAGACTCTGAGGGGGAAGGGTGTGATGATTCGAAAGAATCCGGGGAGAGGAAGGTGAGCCCAAAATGCGCATCAGCTTCGAAGGCCATGCATTTTGAGACGCCAGACATAGCGAGCAAGACATCCAGCATTCCTGAAGTTGAAAAGTCTTCAAAAGATAAGGAGGAAGAGGAAGGGTCGGGTGAAAACCAGAGGGTGGTGAGGGACGAAGGGTCGATGGTAGCTGAATCACTAATGGGCCCTGGTGTGGACCATGAAAGGTGTGGATTATCCATTGAGAAGAATATGGGACCCATGGAGGAAAGTAAGACAATGGGGAGGGAAGTGGACTTGGGCCCAAATACTATTGAGGAAGAGGAGGAAAGTGTAACCCAATGTTGGCCGTGCAGTACAACAACTTCTGAAGTAATTAAGCTGATGAAACAAAGTAAGAAAGGAAAGCGAGTAGAGTGTGGTCCCATTGATGAGAAAGAAGATTCAACTGATGATAGAAGGGGCCCACCGGGATTTGAATTCCAAAATGATCCGGCAGACCTAAACCTGTCAAAAGATCACTCAAATAATCTAGATATGGCAGAGATCAAGGAAGCAGAAGAGGAAAAAGAAATTGAGAGAGCGGCGCCAGCGGCAATGGAAGCAGGCAAGGCTCTTGGATTCCCTGTGGATGAAGATGACAAGGAGCTTTCCAAAGCTCTAACCCGTATTAGAAGAAGGCAGAAGCAAAGAGCGGAAGTAGCGAAAAAGGCTCAGGCGATCCCGGTCCCTGAGAGCTGGAAGTCGAAGTTGAAAAGGCGAATATAA 1899 0.4481 MEREWERERQQERSRQGNIESVWSKRLNKHYTNGCRGRYMFPRGWIRKVGERRFTNRMSKENSARNRPLGSRRVSIFVDNIPWNLGKRGMWNIFRKFGWILDIYISQRQRPARKTTFGFVRFDSKEEAHNAIKGSNGWEVDDTKLTSKWAEAKGRKWENVWRVKGILEVEANKTDREKMQESQKEDIGLEGNSSAGDSVDFMVSNGMVNEDAVNWCGRCGVIKMKDVMDRESFDETVKGEIDGICSIRALDARFMLVEFVNKDVMMEGVKRLREMTIISEANPWEERSYCELRSATVRCLGLPIHGWAKENFRTLMKPWGTFVRFRIDDEFKSVKLIIETTNLEEIKGWINIELGEKIYKIRIVEVTDSEGEGCDDSKESGERKVSPKCASASKAMHFETPDIASKTSSIPEVEKSSKDKEEEEGSGENQRVVRDEGSMVAESLMGPGVDHERCGLSIEKNMGPMEESKTMGREVDLGPNTIEEEEESVTQCWPCSTTTSEVIKLMKQSKKGKRVECGPIDEKEDSTDDRRGPPGFEFQNDPADLNLSKDHSNNLDMAEIKEAEEEKEIERAAPAAMEAGKALGFPVDEDDKELSKALTRIRRRQKQRAEVAKKAQAIPVPESWKSKLKRRI* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0620 632 MobiDBLite consensus disorder prediction 370 385 - -
Aev09g0620 632 MobiDBLite consensus disorder prediction 507 552 - -
Aev09g0620 632 Coils Coil 548 568 - -
Aev09g0620 632 Gene3D - 48 194 IPR012677 -
Aev09g0620 632 SUPERFAMILY RNA-binding domain, RBD 75 162 IPR035979 GO:0003676
Aev09g0620 632 MobiDBLite consensus disorder prediction 370 435 - -
Aev09g0620 632 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 76 145 IPR000504 GO:0003723
Aev09g0620 632 SMART rrm1_1 75 148 IPR000504 GO:0003723
Aev09g0620 632 CDD RRM_SF 76 146 - -
Aev09g0620 632 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 74 152 IPR000504 GO:0003723
Aev09g0620 632 MobiDBLite consensus disorder prediction 507 535 - -
Aev09g0620 632 MobiDBLite consensus disorder prediction 412 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0620 Aev-Chr9 5512045 5513943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0620 75 153 Eukaryotic Initiation Factors Gene Family AT3G11400 30.380 1.01e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0620 - K18405 csin:114272780 115.161