Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0616 ATGGCGTCCAAAGGTCCCAGGTCTAAGATTGATCATGAATCTAGAGCTAAACGGCAAAAGGCGCTTGAAGCTCCAAGGGAGCCTCGGCGTCCCAAAACTCATTGGGACCATGTCTTAGAAGAGATGGTGTGGTTATCAAAGGACTTTGAGTCAGAGAGGAAATGGAAACTAGCTCAGGCAAAGAAAGTTGCTTTAAGAGCCAGCAAAGGCATGGTAGATCAGGCTACAAGAGGTGAAAAGAAGATGAAGGAAGAAGAGCAGCGTGTAAGAAAAGTTGCACTAAATATTTCCAAGGATGTTAAGAAATTCTGGACGAAAATAGAAAAGCTGGTACTTTACAAGCATCAAATGGAGCTTGATGAGAAGAAGAAAAAGGCACTTGACAAACAGCTTGAGTTTCTTTTAGGGCAAACTGAGAGGTACTCATCAATGCTGGCAGAAAATCTTGTGGATGCTCATAAACCAATAGAGAAAAACTCTGCAGGTCATCACCTAAGTTGTCAATACAAGGATGTAAATGGAGACATTGTTAATGAACCCAAGGAAGTTAATGTTGAGCATCAGTTAGATGCACCTGATGATGATGAAGAATATGATGTACAATCTGATGCTGAATCGGAGGATGATGAGAAAACCCTTGAGGAAGATGAAGCTCTTATAACTCAAGAAGAAAGGCAAGAGGAGTTGGCAGCTTTGCATGCTGAAATCGATCTTCCAATTGAAGAGTTACTCAAACGTTATGCTGGTGGGAAAGGAGAGAAAGAAGAATCAGTGAGTCAAGAAAGTAGTCCAGAGCATGATGAAGATGGTGGCAAAATAGTTAGAACTGGTGATGAAAATGGAGATGATGTTTTATATGCCAATGAAATTGGTGCAGGCGACTTCAGAATGACCCCTGGTCGACGTTGTGGTGAAAGTAATGCTGATGTAGCTACACCAGTAAACAATATATCTCAAGATGATGACTATCAATCTGAAAATCTAAAGCAGGTTCCAAGTGAGGCAGCCAATGAAAATGTTGAGCCCGAATTTACTGATTTAGCTACCCTTTTAAACAAAATATCTAAAGATGAAGACCATCAATCTGAAAGTCTAAAGGAGGTTCCCTGTGAGGCGGTCAATGAAAATACTGTGCATGACTTTACTGATGTAGCTACACCAGTAAACAATATATCTAAATTTGAGGACCATCAATCTGAAAATCTAAAGGATGTTCCTAGTGAGGTGGCCAATGGAAGTATTGCACATGACTTGACTGATGTAGCTACACCAGTAAACAATATATCTAGAATTGAGGGCCATCAATCTGAAAATCTAAAGGAGGTTACCAGTGAGGCGGCCAATGAAAATATTGCATATGACTTTACTGATGAAGAGGATGACGGTGATTTCTTGTTTGGCACAGAAGATAAGGATGATGAAACAACCTTATCTGAGGAGGAAAAACTGGAAAGAGTAGATGCAATTGATCCCAAGGATGAGATTGCATTATTGCAAATGGAGAGTGACATGCCTGTTGAGGAACTTCTTGCAAGGTATAAAAAGGATCTGAGTGATTATGAAGATGGGGAAGATGAATCTGACTATGCTTCTGCTTTATCAGAGGAACATTGTGATTCTCCTGTCTATGACGATGCTGGACAGAAGGATCCTGCTCCTATGGATGAAGATATCAAGTCTGAGCATCATGATGCTGTAGAGTCTCAGGCAGAAGAACAATGGGAAGCACCTCATGAAACATCAGAAAAAAAAGAAAGTGAGCATATAATTGCTGATGCAGCTGCTGCTGCAAGATCAGCACAACCTACTGGAAACACCTTCTCCACAACTAAAGTGCGTACAAAGTTCCCTTTTCTACTCAAGTTCTCTCTTCGTGAGTATCAACACATTGGATTGGATTGGCTTGTCACGATGTATGAAAAAAGATTGAATGGAATTTTGGCAGATGAAATGGGGCTTGGAAAAACAATTATGACTATAGCCTTGCTTGCACATCTTGCTTGTGAAAAGGGAATCTGGGGTCCACATCTGATTGTGGTACCAACTAGTGTAATGCTTAACTGGGAGACTGAATTTCTGAAATGGTGTCCTGCTTTTAAAATTTTGACTTATTTTGGAAGTGCGAAGGAGCGAAAACATAAAAGACAGGGATGGTTGAAACCAAACTCATTTCATGTGTGCATAACAACTTATAGATTAGTCATTCAGGATTCCAAAGTTTTTAAGCGCAAAAAGTGGAAATACTTGATCCTAGACGAAGCTCATCTAATAAAGAACTGGAAGTCACAAAGGTGGCAGACACTCTTGAATTTCAATTCAAAAAGACGTATTCTCTTGACTGGTACACCACTGCAGAATGATCTCATGGAGCTGTGGTCTCTAATGCATTTCTTGATGCCCCATGTGTTTCAATCTCATCAGGAGTTTAAGGATTGGTTTTGTAATCCTATATCAGGCATGGTAGAGGGAGAGGAAAAAGTTAACAAGGAGGTTGTTGATCGCCTGCATAATGTTCTACGTCCATTCTTACTCCGCCGGTTAAAGCGAGATGTGGAAAAGCAGCTTCCAATGAAACATGAGCATGTCATATATTGCAGACTGTCAAAGAGGCAGCGCAATTTGTATGAAGACTTCATTGCTAGCTCAGAGACCCAAGCCACTCTTGCAAGTGCCAACTTTTTTGGGATGATTAGTATTATCATGCAACTTCGTAAGGTTTGCAATCATCCTGACCTATTTGAGGGTCGCCCTATTGTCAGTTCTTTTGATATGCGGGGTATTGATATTCAGTTAAGTTCTTCTGTATGCTCCATGCTTTTGCCTAGTCCCTTTTCAACTGTAGACCTAAGAGGCTTAGGCCTTTTATTTACTCATCTTGACTATAGCATGACTTCTTGGGAAAGTGATGAAGTGCTAGCTCTCGAGATCCCTGCAAGTTTAATCATGGAACGCACTAGTACAGATGATCTAGAATTAATTAAGCCTGGGCTGAAATGTCGAAAAAAGCTGCAAGGAATAAACATTTTTGAAGAGATCCGAAGGGCAATTTGGGAAGAGAGGGTAAAACAAGCAAAGGAACATGCAGCATCTATTGCATGGTGGAACTCCTTGAGGTGTAAAAAAAGACCCATCTACTCAACAAGCCTTAGGGATCTTGTTACTTTAAGGCATCCTGTATATGATATTCATCAGAACAAGGCAAACCCTGTTTCATATTTTTACTCATCAAAGCTGGCTGACATTGTTCTATCCCCAGTTGAACGATTTCAAAGGATGACTGATGTGGTTGAAAGTTTCATGTTTGCAATTCCAGCAGCACGAGCACCCTCTCCTGTTTGCTGGTGTAGCAGAAGTGGGACAGATGTGTTCCTGCACCCTTCTTACAAGCAGAAATGCTCTGAAGTTCTGCTGCCACTGCTGTCACCTATCAGGCCTGCAATTGTTCGCCGGCAAGTGTATTTCCCAGATAGGCGTCTTATACAATTTGATTGTGGGAAATTGCAGGAGCTAGCAATATTGTTGAGGAAATTAAAATCAGAAGGTCACCGTGCTTTGATATTCACCCAAATGACAAAGATGCTTGACATACTAGAGGCGTTTATTAATTTGTATGGTTACACTTACATGCGTTTGGATGGATCAACTCAACCAGAGGAGAGGCAGACCTTAATGCAGCGCTTCAACACAAACCCCAAATATTTTCTTTTCATCTTGTCTACCCGCAGTGGGGGCGTTGGTATCAACCTAGTTGGAGCTGACACTGTTATTTTTTATGATAGTGACTGGAATCCTGCTATGGATCAACAGGCTCAAGATCGGTGCCATAGAATTGGTCAGACACGTGAAGTGCATATCTACAGATTAATTAGTGAAAGCACCATTGAAGAGAATATTTTGAGGAAAGCAAATCAGAAGCGTGCACTTGATGATCTTGTTATCCAAAGTGGTGGTTATAATACTGAGTTCTTCAAGAAGCTTGATCCTATGGAACTGTTTTCAGGTCATAGAACACTGCCAATTAAAAATATGCAGGGAACAGACCAGAATAATGGGGAAGTGTCTGTAACTAATGCAGATTTAGAGGCTGCATTAAAATGTGTCGAAGATGAAGCAGATTATATGGCATTGAAGAAAGTTGAAGAGGAAGATGCTGTGGACAACCAGGAGTTTACAGAAGAAGCTATCGGGAGACTTGAAGAGGATGAGTATGGAAATGAGGATGATATGAAGGATGATGAGCCTGTAGAATTTGGTGAATCTGTGTCCAATTTAAGTAAAGAGAATGCATTAATGTTAAACGGAAGTGATCCTGGGGAAGATAGACCACCCTCTGTTATAGCCAAAGAAGATGATGTTGATATGCTGGCTGATGTAAAACAGATGGCTGCTGCTGCTGCTGCAGCTGGACAAGCTATATCTGCCTTTGAGAATAAGCTACGCCCTATTGATCGCTATGCCATTCGTTTTCTGGAGGTGTGGGACCCAATAATAGATAAAACAGCATTGGAGTCTGAAGTCAGGATTGAGGACACAGAATGGGAGTTGGATCGCATTGAAAGGTATAAGGATGAGATGGAAGCTGAAATTGATGAAGACGAAGAACCTCTTGTATATGAAAGATGGGATGCTGATTATGCAACTGAGGCATATCGACAGCAAGTGGAGGCCTTGGCTCAACATCAGTTAATGGAGGAACTAGAATATGAAGCTAGAAAGAAAGCGGAAGCTGAGGAAGAGAATTGTGATTCTAAAAAGACACAAACGCCAAATGATTCGAAGCCCAGATCAAAAAAGAAACCAAAGAAAGCAAAGTTTAAATCTCTGAAGAAAGGATCTTTAACATCTGGCTCTAGACCTGTGAAAGAGCCACAAGCAGAGCTAATGATTATAGATGACGATGTTATCAGAAGTCTTGCTTTTGGGTCTCCAAATTCAGCTATGCAGAAAAAACGTAAAAAATCTAAATTAGCAACTGATGTTGAAGAAGAAAAGAGAATGAAGAAGTCCAAAAAATTCAAGAGGGATCCTCTTGATGTTTGTGCTTCAGATTTAGATTCCAATTTAATAGTCCTGCAGGATGAAAATACAGAAACAAAGGCATGCGAAAGTCTGGTTGACTATGAACAAAAAACTGCAAGCAGGAGTAAGGTGGGTGGAAAAATATCTATCACTCCAATGCCAGTGAAACGGATCTTGATGATTAGACCTGAAAAATTGAAAAAGGGAAATTTTTGGTCCAAAGATTGCATTCCACCAGCTGATTTTTGGTTGCCTCAGGAAGATGCAATATTATGTGGAGTTGTTCATGAATATGGTTCTAACTGGAGTTTGGTTAGCGAAACACTTTATGGCATGACTGCTGGTGGGGCATACAGGGGGAGATATCGTCATCCTGTCCATTGCTGTGAGAGGTTCAGAGAACTATTCCAGAAATATGTATTATACTCTGTAGAGGCTGCAAATCATGAGAAGATCAACAATACTGGCTCTGGAAAGGCTCTTCTTAGAGTTACAGAGGATAACATTCGGCTGTTGGTTGATATTGCTTCTGAGCAGCCAAATAGAGAGTTACTACTGCAGAAGCATTTTTATGCATTGCTTTCATCCGTCTGGAAGGTGGCATCACATGTTGATCGCAGGAAAAATCCATCTCCTAATGGTCTCTATTTTGATAAGAGTTTCCATCCATCCATTGGCCAACATTCACAGAATTCCCTGAAGAAACACTCTGAAAGGTTGACATTCAGTGATATGGCCCAGAGCAAGAAGTTATTAGCAGCTGCACTTGATGACACCAGAACTACGCAAGAGAATGAACCAATCTTCCTCTCTAATCACAGTGAAGACTTGCCAGTCAGTAAAGATCAGTTGGATATAACACTGGAGTTCCCAAGAGAGGATGATGATGCCTTATCTTCATTTCCATCTGTTATAGATTTATCAATCCAGGGGACAGAACCCTTTCCATCTTTAACTAAGCAAGCTGAAGATGATTACCTTAAAGGAGGTTCGTCTGTTGCTGAGAATCGTTTCAGGGAGGCAGCAAGAGTCTGTGAGGAAGACAGTTCAGGATGGGCTTCATCCGCATTCCCAACGAATGATGCGAGGTCTCGACCTGGATCCAGGATGCAACCAATAGGAAAGCAAAAGTCTTCCACCTCTGAATCTAGTAAACTGTCTAAGTCGAAGTCTAAAAGATCTTCAGTGGATTCTAGTGATATGCATCACCAACAGGCTGAACAATCATTCCCCTCTATGCCAACACTTAAGGATCTGAGATTTGATCTCAATGAATCCACTATGGATGACATTGGAATTGATGATATCAATAGCCGTCTCCAGTTTAGCCTCAACACGGAAAGTTCATTTGAACCCGAGAGTTTCGAAGCGTTCCCACATGATTATGTAGCTGGTTTAATCTCAGGCCTTGATGATTGCTCAGCATTTCCTGAATATAATGACATTCGGTAG 6471 0.41 MASKGPRSKIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMVDQATRGEKKMKEEEQRVRKVALNISKDVKKFWTKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSSMLAENLVDAHKPIEKNSAGHHLSCQYKDVNGDIVNEPKEVNVEHQLDAPDDDEEYDVQSDAESEDDEKTLEEDEALITQEERQEELAALHAEIDLPIEELLKRYAGGKGEKEESVSQESSPEHDEDGGKIVRTGDENGDDVLYANEIGAGDFRMTPGRRCGESNADVATPVNNISQDDDYQSENLKQVPSEAANENVEPEFTDLATLLNKISKDEDHQSESLKEVPCEAVNENTVHDFTDVATPVNNISKFEDHQSENLKDVPSEVANGSIAHDLTDVATPVNNISRIEGHQSENLKEVTSEAANENIAYDFTDEEDDGDFLFGTEDKDDETTLSEEEKLERVDAIDPKDEIALLQMESDMPVEELLARYKKDLSDYEDGEDESDYASALSEEHCDSPVYDDAGQKDPAPMDEDIKSEHHDAVESQAEEQWEAPHETSEKKESEHIIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKFSLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGEEKVNKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMRGIDIQLSSSVCSMLLPSPFSTVDLRGLGLLFTHLDYSMTSWESDEVLALEIPASLIMERTSTDDLELIKPGLKCRKKLQGINIFEEIRRAIWEERVKQAKEHAASIAWWNSLRCKKRPIYSTSLRDLVTLRHPVYDIHQNKANPVSYFYSSKLADIVLSPVERFQRMTDVVESFMFAIPAARAPSPVCWCSRSGTDVFLHPSYKQKCSEVLLPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILRKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPIKNMQGTDQNNGEVSVTNADLEAALKCVEDEADYMALKKVEEEDAVDNQEFTEEAIGRLEEDEYGNEDDMKDDEPVEFGESVSNLSKENALMLNGSDPGEDRPPSVIAKEDDVDMLADVKQMAAAAAAAGQAISAFENKLRPIDRYAIRFLEVWDPIIDKTALESEVRIEDTEWELDRIERYKDEMEAEIDEDEEPLVYERWDADYATEAYRQQVEALAQHQLMEELEYEARKKAEAEEENCDSKKTQTPNDSKPRSKKKPKKAKFKSLKKGSLTSGSRPVKEPQAELMIIDDDVIRSLAFGSPNSAMQKKRKKSKLATDVEEEKRMKKSKKFKRDPLDVCASDLDSNLIVLQDENTETKACESLVDYEQKTASRSKVGGKISITPMPVKRILMIRPEKLKKGNFWSKDCIPPADFWLPQEDAILCGVVHEYGSNWSLVSETLYGMTAGGAYRGRYRHPVHCCERFRELFQKYVLYSVEAANHEKINNTGSGKALLRVTEDNIRLLVDIASEQPNRELLLQKHFYALLSSVWKVASHVDRRKNPSPNGLYFDKSFHPSIGQHSQNSLKKHSERLTFSDMAQSKKLLAAALDDTRTTQENEPIFLSNHSEDLPVSKDQLDITLEFPREDDDALSSFPSVIDLSIQGTEPFPSLTKQAEDDYLKGGSSVAENRFREAARVCEEDSSGWASSAFPTNDARSRPGSRMQPIGKQKSSTSESSKLSKSKSKRSSVDSSDMHHQQAEQSFPSMPTLKDLRFDLNESTMDDIGIDDINSRLQFSLNTESSFEPESFEAFPHDYVAGLISGLDDCSAFPEYNDIR* 2157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0616 2156 MobiDBLite consensus disorder prediction 519 587 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 1384 1398 - -
Aev09g0616 2156 Pfam SNF2-related domain 641 913 IPR000330 GO:0005524|GO:0140658
Aev09g0616 2156 Gene3D - 593 869 IPR038718 -
Aev09g0616 2156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 848 1335 IPR027417 -
Aev09g0616 2156 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1169 1319 IPR001650 -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 247 340 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 1 33 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 177 214 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 1399 1414 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 2025 2058 - -
Aev09g0616 2156 PANTHER HELICASE SRCAP-RELATED 3 2078 - -
Aev09g0616 2156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 596 846 IPR027417 -
Aev09g0616 2156 Gene3D - 1753 1813 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 1574 1620 - -
Aev09g0616 2156 Pfam Helicase conserved C-terminal domain 1168 1278 IPR001650 -
Aev09g0616 2156 Gene3D - 870 945 - -
Aev09g0616 2156 SMART helicmild6 1195 1278 IPR001650 -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 1652 1668 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 2059 2073 - -
Aev09g0616 2156 SMART bromneu2 23 94 IPR014012 -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 66 85 - -
Aev09g0616 2156 Gene3D - 1135 1382 IPR027417 -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 247 279 - -
Aev09g0616 2156 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 636 801 IPR014001 -
Aev09g0616 2156 CDD SF2_C_SNF 1154 1289 - -
Aev09g0616 2156 CDD DEXQc_SRCAP 624 846 - -
Aev09g0616 2156 ProSiteProfiles Myb-like domain profile. 1756 1809 IPR001005 -
Aev09g0616 2156 Coils Coil 1508 1528 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 309 334 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 1574 1594 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 189 214 - -
Aev09g0616 2156 ProSiteProfiles HSA domain profile. 22 96 IPR014012 -
Aev09g0616 2156 Coils Coil 1559 1579 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 1384 1414 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 1642 1668 - -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 530 587 - -
Aev09g0616 2156 Pfam HSA domain 27 93 IPR014012 -
Aev09g0616 2156 MobiDBLite consensus disorder prediction 2022 2087 - -
Aev09g0616 2156 PANTHER HELICASE SRCAP 3 2078 - -
Aev09g0616 2156 SMART ultradead3 620 813 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0616 Aev-Chr9 5473985 5490785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0616 644 916 RAD5 or RAD16-like Gene Family AT5G43530 30.124 4.75e-28 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev09g0616 SNF2_N 6.3e-70 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0616 - - aprc:113871102 3053.08