Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0600 ATGAATGCTTGGGTCGGGTTACATGATGGATCAGTGGATACTGTTATAGATAGAAATATGGCTGTCCCAAAAGTGAATGAAAAGTTGCTTCAGGACCTTGAAGAAATGGGATTTCCACGGCCACGAGCAACTCGAGCACTTTACTATTCAGGCAATACTAGCTTAGAGGATGCAATAAATTGGACAGTTGATCATGAAAATGACCCTGATTTTGATGAGATGCCATTGGTAGATATAGACATTGAAATCGAGTCTTCTGAATCGTTCCCTATCACAGAAGAAATAAGAACCAAAGCACAGAAGTTAAGAGAACAAGAGCTGAAGAGGAAAGAGGATGAAGAAAAAAAATTGGAGAGGGAAAGGGAGAAGCAGAGGATTCAAGCAGGTAAGAAACTCCTCGAGGCGAAGCGGATAGCCGAAGAAAATGAAAGACAACGGAATTTAGCATTAAGAAAAGCAGAGAAGGAAGAAGAGAAAAGAGGAAGGGAAAGGGTTCTACTGAAACTGGAACAAGATAAGATAAACAGAAGGTCCAAACATGTATTGCCTTCAGAAGGCCAAGCTATTGAGAGATCATCTGCCATTGTGATGCAGCAAGAAAAGAATCTGAAGCCTGTTTATTACACAACTACAAAAGTTGAGCACTTAAGAGAATGTCTAAGGTCTCTCAAGCGTAAACACCAGGGTGAGCATGGAAGAGTCAAAAAGGCCTATGAAACACTTCTAATATATGTTGGAAATGTTGCAAAGAATCCCAACGAGGAAAAGTACAGGAAGATCCGATTGACCAACCCATTATTCCAGGAAAGAGTTGGAAGCTTGAATGGAGGTATAGAGTTTCTTGAGCTCTCTGGTTTTGAAAGAACTGGTGATTTCTTGTATCTGCCTCGTGAAAAGGTTGACTTGGAATTACTAAATTCAGCTGGTACTGTGTTGAATTCTGCTATGACAAATCCTTTCTTTGGACTTTTAAGTACTTAG 981 0.4016 MNAWVGLHDGSVDTVIDRNMAVPKVNEKLLQDLEEMGFPRPRATRALYYSGNTSLEDAINWTVDHENDPDFDEMPLVDIDIEIESSESFPITEEIRTKAQKLREQELKRKEDEEKKLEREREKQRIQAGKKLLEAKRIAEENERQRNLALRKAEKEEEKRGRERVLLKLEQDKINRRSKHVLPSEGQAIERSSAIVMQQEKNLKPVYYTTTKVEHLRECLRSLKRKHQGEHGRVKKAYETLLIYVGNVAKNPNEEKYRKIRLTNPLFQERVGSLNGGIEFLELSGFERTGDFLYLPREKVDLELLNSAGTVLNSAMTNPFFGLLST* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0600 326 Pfam PUB domain 234 301 IPR018997 -
Aev09g0600 326 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 24 65 IPR015940 -
Aev09g0600 326 Coils Coil 95 127 - -
Aev09g0600 326 Pfam UBA/TS-N domain 26 61 IPR015940 -
Aev09g0600 326 Coils Coil 138 172 - -
Aev09g0600 326 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 20 326 - -
Aev09g0600 326 PANTHER F13M7.16 PROTEIN 20 326 - -
Aev09g0600 326 SUPERFAMILY UBA-like 21 76 IPR009060 GO:0005515
Aev09g0600 326 SUPERFAMILY PUG domain-like 209 320 IPR036339 -
Aev09g0600 326 Gene3D - 27 72 - -
Aev09g0600 326 CDD UBA_PUB_plant 25 72 - -
Aev09g0600 326 Gene3D - 212 315 - -
Aev09g0600 326 SMART PGNneu 236 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0600 Aev-Chr9 5331450 5341920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0600 20 324 C2H2 Transcription Factor Family AT1G04850 58.252 5.88e-97 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0600 K24348 - gmx:100781260 437.187