Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0564 ATGGATGGTCTCAATTGGGATGATGCATCATCATCACAACTTGCAAAAACTACACCAATAATCCATTGGAGCACACAGCAACAACATCAAGACCTTGAAGAGATGCAGAGGAAATCTCATCAAACATTATTTCATACATACACAAATTCTGATGAAGATATGATTTATCATCATCAGCCAGAAGAAGTTGCTATCTCTAGATCAGATATAATGGATAATGTGATTATGCCAAACACAAATCCATCACAGAATCATCATCATACAGAAGCAGCAACCATGATGGTGAAATCAAGAGCTGGTGGATCCAATTGGGAACCATACAACAATAGTGCTATGAACCAGATAAGTAATAACTATATGCCAGAATTTTTCAACATGGCCAACCAACACAATCTTATCAATGGAAATGGAAATGGTAGTAGTAGTAGTGGTTGTAATTCTCTTGAATCTATTGATTGCTTGATTTCAGCTGCTAACAGAAACACTGAAAAATCTGTTGAGGATATATTATCTGACAGCAGAAACAAATCATGGAACTATTTCACTTATGGAAGCAATAATGCAGTTTCCTCTGGTGAATCTGATAGCAATAATGCTTCCAATTCCAATAAAAACAATGGTAGAAATTACAGAAACAAAGACATGAAAAGTTCAATCAATATTGAACTTGATCATGAAACAATGTCTCAAAGCTCCTCATATCAACATCATCAACACATCAATCAAGGAAAAGGAACAACAGAACTATTCAAAATTGCTGATTCCTCAAAGAGGAGCAACAATTTTGTTCATCAGAGTTATTCTTCTGCTGCTACTACTGAAGGAGGTGGATTCAACAACATTATCTCACAGAATCAAGCAAAATCAAAGAAACCCAGATGGGAAAAGAGTCCAAATTCATCAACCATCAATTTCCAGCATCATCCAAACAACAACAATAACAACTCATCAGCATCATCATCATCATCACCTGAAGAACAAGAGGCTGATGCAGAGGCCATAGCACAAATGAAGGAAATGATATACAGAGCAGCGGCATTTAGACCTTTGAACTTATTTGAAGAAGTGATAACAGAAAAGAAACCAAAGAGGAAGAATGTGAAGATCTCAAATGATCCACAAACAGTTGCTGCAAGACAGAGAAGAGAAAGGATAAGTGAGAGGATAAGGGTTTTGCAAAAACTAGTACCTGGTGGGAACAAGATGGACACTGCATCAATGCTTGATGAAGCTGCAAATTACCTCAAGTTTCTTAGATCACAAGTTAAGGCACTTGAAAATCTTGGGAACAAGGTTGATAAGACAATGATGAATTACCACCCTACTAGTATTGCTTTCTCCTTCAATCCTTATTTTCACTACAATTATTCTCAGGGTTGA 1380 0.3652 MDGLNWDDASSSQLAKTTPIIHWSTQQQHQDLEEMQRKSHQTLFHTYTNSDEDMIYHHQPEEVAISRSDIMDNVIMPNTNPSQNHHHTEAATMMVKSRAGGSNWEPYNNSAMNQISNNYMPEFFNMANQHNLINGNGNGSSSSGCNSLESIDCLISAANRNTEKSVEDILSDSRNKSWNYFTYGSNNAVSSGESDSNNASNSNKNNGRNYRNKDMKSSINIELDHETMSQSSSYQHHQHINQGKGTTELFKIADSSKRSNNFVHQSYSSAATTEGGGFNNIISQNQAKSKKPRWEKSPNSSTINFQHHPNNNNNNSSASSSSSPEEQEADAEAIAQMKEMIYRAAAFRPLNLFEEVITEKKPKRKNVKISNDPQTVAARQRRERISERIRVLQKLVPGGNKMDTASMLDEAANYLKFLRSQVKALENLGNKVDKTMMNYHPTSIAFSFNPYFHYNYSQG* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0564 459 Pfam Helix-loop-helix DNA-binding domain 379 418 IPR011598 GO:0046983
Aev09g0564 459 Gene3D - 374 439 IPR036638 GO:0046983
Aev09g0564 459 MobiDBLite consensus disorder prediction 273 330 - -
Aev09g0564 459 MobiDBLite consensus disorder prediction 273 288 - -
Aev09g0564 459 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 450 IPR045843 GO:0003700|GO:0006355
Aev09g0564 459 SMART finulus 375 424 IPR011598 GO:0046983
Aev09g0564 459 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 375 430 IPR036638 GO:0046983
Aev09g0564 459 Coils Coil 408 428 - -
Aev09g0564 459 MobiDBLite consensus disorder prediction 189 213 - -
Aev09g0564 459 MobiDBLite consensus disorder prediction 189 208 - -
Aev09g0564 459 MobiDBLite consensus disorder prediction 296 327 - -
Aev09g0564 459 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 369 418 IPR011598 GO:0046983
Aev09g0564 459 PANTHER TRANSCRIPTION FACTOR BHLH87 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0564 Aev-Chr9 5045405 5046784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0564 273 456 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 62.162 2.36e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g0564 HLH 1.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0564 - - gmx:100793830 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0564 09 5045405 5046784 Aev09g0564 09 5045405 5046784 ECH