Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0549 ATGCTTCCATCATCTAATAATCAAGAGCACAAGAAAGAGGAAGAGAACAATACACAAAAGGAACGTGGAAAATTTTCTTCATCGTCATCAAAGGGACCAAAAAGCAATAAGAAGGAATTGCAATGTAAGTTTTGCAATAAAAGATTTTCCAATAGTCAAGCTTTGGGAGGCCATCAAAATGCACATAAAGAAGAGAGAGCTGCAGCAAGAAAAGAGAGTATTCTCACCATGGCTTCGGCTTACAGCGACACGAATTCTAATTCTTGTGTTCAAAATTATTATTCTTCTGTGGAGAATAATAACAAAACTTTTAGGGTTCAACCATCGTTGCCAATAGTTCAGAGTCAACAGGTTCCTCTCGGACCAGGTTATAACCATAATGTAATGCTCGGAAGGCCAATCATGAATGTCAATTCTCAACCAACCATGAATCAGCTTCAAGCATTGATGCTGGCGGATCGATTTCGGGATCAGAAGACTAATCTCTCGGGATATGGAATAAGAACATCAAATTTAGGTTTGCAACCAAATTTACTAGAAAATCAAAATCCTCTCCAAGCAAGTAGTTCTTTACCTAGACTTGAATATAATTTGTGTGATAGTCAAAATTCTGATCAAGCAAACCATTCTTTAAGGCTTCCAAAGAATGATAATAAAGAGGAGGAACTTGATTTGACGCTCAAGCTATGA 690 0.3725 MLPSSNNQEHKKEEENNTQKERGKFSSSSSKGPKSNKKELQCKFCNKRFSNSQALGGHQNAHKEERAAARKESILTMASAYSDTNSNSCVQNYYSSVENNNKTFRVQPSLPIVQSQQVPLGPGYNHNVMLGRPIMNVNSQPTMNQLQALMLADRFRDQKTNLSGYGIRTSNLGLQPNLLENQNPLQASSSLPRLEYNLCDSQNSDQANHSLRLPKNDNKEEELDLTLKL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0549 229 PANTHER ZINC FINGER PROTEIN JAGGED 6 229 IPR045320 GO:0003700
Aev09g0549 229 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
Aev09g0549 229 MobiDBLite consensus disorder prediction 7 21 - -
Aev09g0549 229 PANTHER ZINC FINGER PROTEIN KNUCKLES 6 229 - -
Aev09g0549 229 SUPERFAMILY beta-beta-alpha zinc fingers 36 67 IPR036236 -
Aev09g0549 229 MobiDBLite consensus disorder prediction 205 229 - -
Aev09g0549 229 MobiDBLite consensus disorder prediction 1 38 - -
Aev09g0549 229 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
Aev09g0549 229 Gene3D Classic Zinc Finger 15 96 - -
Aev09g0549 229 MobiDBLite consensus disorder prediction 212 229 - -
Aev09g0549 229 Pfam Translocated intimin receptor (Tir) C-terminus 45 116 IPR022639 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0549 Aev-Chr9 4908620 4909309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0549 35 110 C2H2 Transcription Factor Family AT5G14010 36.145 2.91e-10 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev09g0549 Tir_receptor_C 4.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0549 - - ahf:112708745 102.449