Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev09g0549 | ATGCTTCCATCATCTAATAATCAAGAGCACAAGAAAGAGGAAGAGAACAATACACAAAAGGAACGTGGAAAATTTTCTTCATCGTCATCAAAGGGACCAAAAAGCAATAAGAAGGAATTGCAATGTAAGTTTTGCAATAAAAGATTTTCCAATAGTCAAGCTTTGGGAGGCCATCAAAATGCACATAAAGAAGAGAGAGCTGCAGCAAGAAAAGAGAGTATTCTCACCATGGCTTCGGCTTACAGCGACACGAATTCTAATTCTTGTGTTCAAAATTATTATTCTTCTGTGGAGAATAATAACAAAACTTTTAGGGTTCAACCATCGTTGCCAATAGTTCAGAGTCAACAGGTTCCTCTCGGACCAGGTTATAACCATAATGTAATGCTCGGAAGGCCAATCATGAATGTCAATTCTCAACCAACCATGAATCAGCTTCAAGCATTGATGCTGGCGGATCGATTTCGGGATCAGAAGACTAATCTCTCGGGATATGGAATAAGAACATCAAATTTAGGTTTGCAACCAAATTTACTAGAAAATCAAAATCCTCTCCAAGCAAGTAGTTCTTTACCTAGACTTGAATATAATTTGTGTGATAGTCAAAATTCTGATCAAGCAAACCATTCTTTAAGGCTTCCAAAGAATGATAATAAAGAGGAGGAACTTGATTTGACGCTCAAGCTATGA | 690 | 0.3725 | MLPSSNNQEHKKEEENNTQKERGKFSSSSSKGPKSNKKELQCKFCNKRFSNSQALGGHQNAHKEERAAARKESILTMASAYSDTNSNSCVQNYYSSVENNNKTFRVQPSLPIVQSQQVPLGPGYNHNVMLGRPIMNVNSQPTMNQLQALMLADRFRDQKTNLSGYGIRTSNLGLQPNLLENQNPLQASSSLPRLEYNLCDSQNSDQANHSLRLPKNDNKEEELDLTLKL* | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev09g0549 | 229 | PANTHER | ZINC FINGER PROTEIN JAGGED | 6 | 229 | IPR045320 | GO:0003700 | |
Aev09g0549 | 229 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 40 | 67 | IPR013087 | - | |
Aev09g0549 | 229 | MobiDBLite | consensus disorder prediction | 7 | 21 | - | - | |
Aev09g0549 | 229 | PANTHER | ZINC FINGER PROTEIN KNUCKLES | 6 | 229 | - | - | |
Aev09g0549 | 229 | SUPERFAMILY | beta-beta-alpha zinc fingers | 36 | 67 | IPR036236 | - | |
Aev09g0549 | 229 | MobiDBLite | consensus disorder prediction | 205 | 229 | - | - | |
Aev09g0549 | 229 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Aev09g0549 | 229 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 42 | 62 | IPR013087 | - | |
Aev09g0549 | 229 | Gene3D | Classic Zinc Finger | 15 | 96 | - | - | |
Aev09g0549 | 229 | MobiDBLite | consensus disorder prediction | 212 | 229 | - | - | |
Aev09g0549 | 229 | Pfam | Translocated intimin receptor (Tir) C-terminus | 45 | 116 | IPR022639 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev09g0549 | Aev-Chr9 | 4908620 | 4909309 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev09g0549 | 35 | 110 | C2H2 Transcription Factor Family | AT5G14010 | 36.145 | 2.91e-10 | 55.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aev09g0549 | Tir_receptor_C | 4.4e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev09g0549 | - | - | ahf:112708745 | 102.449 |