Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0534 ATGGATCATTTACTTAAACTCAATTTGGTGGCTTTCAGAAACCATGGCTTCTTTGTGTCACAAAAATATGACACAAAGTTTGATCCATTGTTGTTTCCTGAAACTGAAAATGTTGAAATAAGGACAAATGGTTTAAGCCAAGCCAATTTTTTAAGCAAATTAACATTCTCTTGGATTAATCCATTGCTCTCTTTGGGTTACAAAAAGCCATTATCTCTTGAAAACATTCCTCCTTTACCTTCTGAAGACAGAGCTGAAGTCTCATACAAAAAGTTCGCGATTGCTTTGGATTCTTTGTTAACCGAAAGGAACTCGAATAGTCCTAGTAAGAATTTGGTTATAATGGCATTGATAAGAGTGTTTTGGAAGGAGAATGTTTATATAGCAGTGAATGCATTGGCAAGATCAGTTTCTGCATCAGTTTCTCCTCTTATAATCTTTGCTTTTGTGAACTATGCGAACCGCGAAGAAGATAACTTGTGTGAGGGGCTTTCTATTTTGATGTGCCTTGTTGTGGCCAAATTGGTGGAATGCTGGTGCCAGAGGCATTGGAACTTCGACGCGAGGCGGTCAGGGATGAGGATTAGATCGGCAGCTATGGTTGCCGTGTACCACAAGCTTTTGAAGATTTCAAGCTTAGGAAGGCGAAGACACTCGAATGGAGAGATTGTGAATTACATAGCAGTTGATGCATACAGATTTGGGGAATTCTTGTGGTGGTTTCATACCGGGTGGAGCCTTGCATTGCAAGTCATCTTAGGAATTTGTGTTCTTTATTATGTTGCAGGAATCAGTGCTCTTCCTGGATTAGTCCTTCTTCTCATGTTTGGTATTTGCAATGTTCCATATGCAAATAAGATAAAGAATTGTCAGTCACAGATCTTGTTTTCGCAGGATCAACGGCTGAGATCCACGTCTGAGATCCTGAACAATATCAAGATCATCAAGCTTCAATCGTGGGAGGATAAGTTCAAGAGCTTGCTTGAATCGCTTCGCGATAGCGAGTTCAAGTGGTTGGCTGAGACACAGTTCACTAAGGCTTTAGGAACCTTACTCTGGATCATTTCACCAACCATCATCTGTGTTGTTGTCTTGTTAGGATGTGTGTTCTTCGGGACGGCGTCGTTGGATGCTGCAACAATTTTTACGGTGCTCGCCACGTTGAGGAGCATGAGTGAGCCTGTGAAGTTGATACCTGAGGCTCTTTCTGTCATTAGTCAAGTTAAGATCTCAGGTGATAGGCTTAACAGTTTTCTACTTGATCATGAGCTTAAAACTGATGAAAAGAGGAGTGTTCTGATGATTCCGGATTCGGATAAATTCATCGAGATAGAGGCAGGTTGTTTTAGTTGGGATGAGGAATCATTAAACCTGAATTTGAGAGACATCAATTTGGACATAAAAAAGGGACAAAAGGTTGCAGTTTGTGGACCAGTTGGAGCTGGAAAGTCTTCTTTATTGCAAGCAATCTTAGGAGAGATGCCAAAAGTTTCAGGAACTGTTAATTTGTATGGAAGAGTGGCCTATGTTTCTCAAACTTCTTGGATCCAGAGTGGGACTATTAGGGATAACATACTCTTTGGAAAACCAATTGAAGGAGATAGGTATGAGAATGTCATTAAATCCTGTGCTTTGGACAAGGATATAAATACTTTTAGCCATGGTGATCTTACTGAGATAGGTCAGAGAGGGCTTAACTTGAGCGGCGGCCAGAAGCAGCGAGTCCAACTCGCTCGCGCCGTCTATAATGATGCCGATATATATCTTCTAGATGATCCTTTCAGTGCAGTAGATGCACATACTGCTGCAATTCTGTTCCATGATTGTGTCATGAGTGCTCTCAGAGATAAAACAGTCATACTAGTGACCCATCAAGTGGAGTTTCTAACAGAAGTTGACAAAATTCTGGTCATGGAAGGTGGGTGCATTTCTCAAGCAGGAAGCCATGAGGAGCTATTAACACTTGGAACAACCTTTGAACAACTCATGAATGCTCATAAAGATGCAATAACTCTATTTGGAGCATTCCATCAAAACCAAGAAAATTCTCATCATCAAGTACCAAATGGAGTCAATAAAACTGAAGAGAAGAACAATAGTACTAGAGAAATATGTGAGGCAAACTTTGAAGAGAAACAACTGACAGAAGAAGAACAGAGAGAAAGTGGAAGTGGTGGATGGAAAGTGTTCATTGATTACATAGTGATCTCTAAAGGGAAGATGCTTCTATGTTATTGCTTAGTATCTCTAATAGTTTTCTCTCTTCTTTCTGCTGCATCATCTTATTGGCTTGCTATAGCAAGTGATATTCCAAGCATCAGTAGTGTAATGCTTGTTGGAGTTTACACTATTTTGTCACTTTCAAGTGCTATTATTGTTTACATTAGGTCTCTCTTTGTGGCTCATCTTGGATTGAAGGCTTCTATAGCATTCTTCTCAGGTTTCACTTCTGCCATTTTTAATGCTCCCATGTCCTTCTTTGACTCAACTCCTGTTGGAAGGATTTTGACTCGGGCTTCATCAGATTTGAATACAATGGATGTTGATATGCCTTTTGGGCTAGTCTATGTAGCACAAAGTGGATGTGAACTTCTAACAGGAATTGCAATTATGACTTCAATCACATGGGAAGTTCTTATTCTTGCCATTCTAACTCTGCTAGTTGCAAAGTACCTTCAGGGTTATTATCAAGGTTGTGCAAGAGAACTTGTGAGAATTAATGGAACAACAAAAGCACCAGTTATGAATTACACAACAGAGACATCAGCAGGAGTTGTCACAGTAAGAGCTTTCAAGATGATGGACACATTCTTCCAAACATTCCTTAATCTGGTTGACTCTGATGCTTCACTTTTCTTGTATACCAATGCTGCTATGGAGTGGTTACTTCTAAGAATTGAATTACTTCAAAGTTTGATCCTCTTCACTACAGCTTCTTTTTTTGTGTTCCTTCCCAAGGGATCAATTGCTCCAGGGCTTGTAGGACTTTCTCTATCTTATGCCCTGTCATTAACAAGATCACAAATTTTTTTTACTCAATGGTATTGTCAATTATCAAACTTCATCATCTCTATTGAAAGAATTAAACAGTTCATGGAGATACCACAAGAGCCTCCAAAAATAGTGGAGGATAAAAGGCCACCATCTTCATGGCCCTTCAAGGGTAGGATAGATTTTCAAGATTTGAAGGTTAGGTACAGAGCAAATGGTCCATTAGTATTGGATGGAATAAGATGTAGTTTAAGAGAAGGGACAAGAGTTGGAGTTGTGGGAAGGACTGGAAGTGGGAAGACAACACTTGTAAGTGCATTGTTCCGTTTGGTGGAGCCCACAAGTGGTCTCATTCTCATTGATGGCCTTAACATTTGCTCCATTGGACTCAAGGATTTGAGATTGAAGCTTAGCATCATTCCCCAAGACCCTGTTCTTTTTAGGGGTAGTGTTCGCACCAACTTGGATCCACTTCACCAATTCTCTGATCATCAGATATGGAAGGTTCTAGAGATGTGTCAACTGAAGGAGGTTATAAGTGGACTTCCATATCTATTGGATTCATCTGTGAGTGATGAAGGGGAAAATTGGAGTGTAGGGCAACGGCAACTATTTTGCCTAGGAAGAGTGCTTTTGAGAAGGAACAAAATTGTAGTGTTGGATGAAGCAACAGCTTCTATTGACTCTGCAACCGATGCCATTTTGCAAAGACTCATCAGAGACCAATTCTCTGAATGCACAGTTCTCACTGTCGCTCATAGAGTCCCATCTGTTATACACGCTGATATGGTCATGGTTCTTTCTTATGGGAAATTGGTGGAGTATGATGAACCTTCAAAGCTAATGGAGGCTAGTTCTTCTTCATTCGCCAAGCTTGTAGCTGAATACTGGTCCAGCTGCAGGAGGAACACTTTCTAA 3909 0.4037 MDHLLKLNLVAFRNHGFFVSQKYDTKFDPLLFPETENVEIRTNGLSQANFLSKLTFSWINPLLSLGYKKPLSLENIPPLPSEDRAEVSYKKFAIALDSLLTERNSNSPSKNLVIMALIRVFWKENVYIAVNALARSVSASVSPLIIFAFVNYANREEDNLCEGLSILMCLVVAKLVECWCQRHWNFDARRSGMRIRSAAMVAVYHKLLKISSLGRRRHSNGEIVNYIAVDAYRFGEFLWWFHTGWSLALQVILGICVLYYVAGISALPGLVLLLMFGICNVPYANKIKNCQSQILFSQDQRLRSTSEILNNIKIIKLQSWEDKFKSLLESLRDSEFKWLAETQFTKALGTLLWIISPTIICVVVLLGCVFFGTASLDAATIFTVLATLRSMSEPVKLIPEALSVISQVKISGDRLNSFLLDHELKTDEKRSVLMIPDSDKFIEIEAGCFSWDEESLNLNLRDINLDIKKGQKVAVCGPVGAGKSSLLQAILGEMPKVSGTVNLYGRVAYVSQTSWIQSGTIRDNILFGKPIEGDRYENVIKSCALDKDINTFSHGDLTEIGQRGLNLSGGQKQRVQLARAVYNDADIYLLDDPFSAVDAHTAAILFHDCVMSALRDKTVILVTHQVEFLTEVDKILVMEGGCISQAGSHEELLTLGTTFEQLMNAHKDAITLFGAFHQNQENSHHQVPNGVNKTEEKNNSTREICEANFEEKQLTEEEQRESGSGGWKVFIDYIVISKGKMLLCYCLVSLIVFSLLSAASSYWLAIASDIPSISSVMLVGVYTILSLSSAIIVYIRSLFVAHLGLKASIAFFSGFTSAIFNAPMSFFDSTPVGRILTRASSDLNTMDVDMPFGLVYVAQSGCELLTGIAIMTSITWEVLILAILTLLVAKYLQGYYQGCARELVRINGTTKAPVMNYTTETSAGVVTVRAFKMMDTFFQTFLNLVDSDASLFLYTNAAMEWLLLRIELLQSLILFTTASFFVFLPKGSIAPGLVGLSLSYALSLTRSQIFFTQWYCQLSNFIISIERIKQFMEIPQEPPKIVEDKRPPSSWPFKGRIDFQDLKVRYRANGPLVLDGIRCSLREGTRVGVVGRTGSGKTTLVSALFRLVEPTSGLILIDGLNICSIGLKDLRLKLSIIPQDPVLFRGSVRTNLDPLHQFSDHQIWKVLEMCQLKEVISGLPYLLDSSVSDEGENWSVGQRQLFCLGRVLLRRNKIVVLDEATASIDSATDAILQRLIRDQFSECTVLTVAHRVPSVIHADMVMVLSYGKLVEYDEPSKLMEASSSSFAKLVAEYWSSCRRNTF* 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0534 1302 Gene3D ABC transporter type 1, transmembrane domain 706 1038 IPR036640 GO:0005524|GO:0016021
Aev09g0534 1302 Gene3D ABC transporter type 1, transmembrane domain 101 419 IPR036640 GO:0005524|GO:0016021
Aev09g0534 1302 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 132 407 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev09g0534 1302 SUPERFAMILY ABC transporter transmembrane region 114 421 IPR036640 GO:0005524|GO:0016021
Aev09g0534 1302 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 7 1298 - -
Aev09g0534 1302 Pfam ABC transporter transmembrane region 743 1004 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev09g0534 1302 Pfam ABC transporter transmembrane region 148 388 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev09g0534 1302 Pfam ABC transporter 1074 1222 IPR003439 GO:0005524
Aev09g0534 1302 Gene3D - 420 686 IPR027417 -
Aev09g0534 1302 CDD ABC_6TM_ABCC_D2 746 1032 IPR044726 GO:0140359
Aev09g0534 1302 CDD ABC_6TM_ABCC_D1 127 415 IPR044746 GO:0140359
Aev09g0534 1302 Pfam ABC transporter 460 594 IPR003439 GO:0005524
Aev09g0534 1302 SUPERFAMILY ABC transporter transmembrane region 738 1039 IPR036640 GO:0005524|GO:0016021
Aev09g0534 1302 SMART AAA_5 1083 1268 IPR003593 -
Aev09g0534 1302 SMART AAA_5 469 642 IPR003593 -
Aev09g0534 1302 CDD ABCC_MRP_domain1 442 641 - -
Aev09g0534 1302 CDD ABCC_MRP_domain2 1055 1275 - -
Aev09g0534 1302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 665 IPR027417 -
Aev09g0534 1302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1047 1287 IPR027417 -
Aev09g0534 1302 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 7 1298 - -
Aev09g0534 1302 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 442 665 IPR003439 GO:0005524
Aev09g0534 1302 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1057 1291 IPR003439 GO:0005524
Aev09g0534 1302 ProSitePatterns ABC transporters family signature. 567 581 IPR017871 GO:0005524
Aev09g0534 1302 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 747 1020 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev09g0534 1302 Gene3D - 1040 1293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0534 Aev-Chr9 4775272 4783891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0534 460 702 Calmodulin-binding Proteins AT2G36910 27.308 3.74e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0534 - - qlo:115991486 1670.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0534 09 4775272 4783891 Aev09g0534 09 4775272 4783891 ECH