Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev09g0513 | ATGGGGAGGAGGATATTGAACGACGCATTAAGGAGTATGGTGAATGCTGAGAAGAGAGGGAAAGCTTCCGTGGAGCTCAAGCCCATCTCCACTGTCATCTCTTCCTTTCTCCAAATCATGAAACATCGAGGCTATATCAAGAACTTTCAGGTCTATGATCCACATAGAGTGGGGAGGATAACAGTTGAACTGCAAGGTAGGATTAATGATTGCAAAGCCCTCACATACCGACAAGACATCAAAGCAAAGGAAATTGAAGCCTACAGATTGCGTACTCTTCCAACACATCAGTGGGGTTATGTTGTGATCACAACTCCTGATGGTGTTTTGGATCATGAAGAGGCCATGAAGAGGAATGTAGGTGGCCAAGTTCTTGGTTACTTTCACTAA | 390 | 0.4436 | MGRRILNDALRSMVNAEKRGKASVELKPISTVISSFLQIMKHRGYIKNFQVYDPHRVGRITVELQGRINDCKALTYRQDIKAKEIEAYRLRTLPTHQWGYVVITTPDGVLDHEEAMKRNVGGQVLGYFH* | 130 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev09g0513 | 129 | PANTHER | 40S RIBOSOMAL PROTEIN S15A | 1 | 129 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
| Aev09g0513 | 129 | Gene3D | - | 69 | 129 | - | - | |
| Aev09g0513 | 129 | Gene3D | - | 2 | 68 | - | - | |
| Aev09g0513 | 129 | SUPERFAMILY | Ribosomal protein S8 | 3 | 129 | IPR035987 | GO:0003735|GO:0005840|GO:0006412 | |
| Aev09g0513 | 129 | PANTHER | 40S RIBOSOMAL PROTEIN S15A-2 | 1 | 129 | - | - | |
| Aev09g0513 | 129 | Pfam | Ribosomal protein S8 | 6 | 127 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev09g0513 | Aev-Chr9 | 4561717 | 4563305 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aev09g0513 | 1 | 129 | Cytoplasmic Ribosomal Protein Gene Family | AT4G29430 | 85.271 | 5.15e-84 | 239 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev09g0513 | K02957 | - | jre:108989768 | 240.736 |