Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0508 ATGAAAAAAGCCATGAACACCAATTTCTCAACAAGAAATGGTAACACCACAACCCAGGCTTGCGCTGCGTGCAAGTACCAACGAAGAAAGTGCGCTCCTGACTGCATCCTCGCCCCTTACTTCCCTCACGATCGCCAGAGGCAGTTCCTCAACGCTCACAAGCTCTTCGGCGTTAGGAACATCACCAAGATCATTGAATGTCTTGAGCATAACGATAAGGATCAGGCTATGCGTAGCATCATATTCCAATCTGATATGCGTGCTAGCGATCCTGTTGGCGGTTGTTACCGTTACATACAGGATCTTCAGACTCAGATAGAGTATTATAGGGCAGAGCTTGAACTCATCTTGCAACATCTCGCAATATTGAGATCTCATCAGGTTTATAATCCGACAACGAGTAATGTTGATGTCAATGTAAACGCAGGGGACGATGTCATGAATGCAGATCCTATGGCGTTGTATAATTCCGGTGGCGGTGGCGCCGGTGCCGGTGTTATTGTTGGTGGTAATGGAAATTACCATTATGTCCATCAACAACACGTGGCACCGCCACCTCCACAGCATGAGCAATATATAATAATGCAAGAAGGGAATGATAGCAACAGCAATAACAATAACAATAATACGCATTTGCAAGAGCAGGTTAATATGTGGGCAATTCAGAATTCTCTGTCTTCGTTGTCGTTGCAGGGGCAAAATAGTAACAACGGAAGTGTTGGTGATGAGTATGATGCTAAACCTATGCTTGATCTGGGTTCAGATGATAGAAATGAACTCGGATTTGAGCCCGAAGACTTAGTTCATCATCGCAGTGATGAAGCAGTTTTGCTTAAGATAGATGATGAAGTAATAAAAGCAGAAGCTGATTGCATGCACCAAGCTCAAGATCATGATCTGAAAGGTGCAGCAACTTTGTTCACTCTCACAAATTGTACTAGCTGA 945 0.4402 MKKAMNTNFSTRNGNTTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVRNITKIIECLEHNDKDQAMRSIIFQSDMRASDPVGGCYRYIQDLQTQIEYYRAELELILQHLAILRSHQVYNPTTSNVDVNVNAGDDVMNADPMALYNSGGGGAGAGVIVGGNGNYHYVHQQHVAPPPPQHEQYIIMQEGNDSNSNNNNNNTHLQEQVNMWAIQNSLSSLSLQGQNSNNGSVGDEYDAKPMLDLGSDDRNELGFEPEDLVHHRSDEAVLLKIDDEVIKAEADCMHQAQDHDLKGAATLFTLTNCTS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0508 314 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Aev09g0508 314 Pfam Lateral organ boundaries (LOB) domain 20 115 IPR004883 -
Aev09g0508 314 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 250 - -
Aev09g0508 314 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 14 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0508 Aev-Chr9 4523145 4525096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0508 19 271 AS2 family AT3G13850 44.141 8.29e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev09g0508 LOB 9.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0508 - - pvu:PHAVU_010G138500g 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0508 09 4523145 4525096 Aev09g0508 09 4523145 4525096 ECH