Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0505 ATGACGAAGGATTTGATGTTGTACCAGGATTTAGAGGTACAACAAGAAGTGGATGAGAACATGTCTAATTTGACATGTGCATCAAATGAAGGTACTAATAACAGTGTTTCTTCAGGAATTGGCATAAGTAATAATAATTACTCTCAGCACCAACAACAACAACAATACTTTGTTTCAACAACAACAACTCATGATGAGCCACCAAAGAGAAAAAGAAACCTCCCTGGCAACCCAGACCCAGATGCAGAGGTTATAGCTTTATCCCCAAAGTCTCTTTTGGCAACAAACAGGTTCATTTGTGAGATCTGCAACAAAGGATTCCAAAGGGACCAGAATCTGCAACTTCACAGAAGAGGCCACAACTTGCCATGGAAGCTGAAGCAGAGAGCAAACAAAGATGGCATTATTAGGAAGAAAGTGTATGTGTGCCCTGAGCCTACATGTGTCCACCATGACCCTTCAAGGGCTTTGGGGGACCTCACAGGCATCAAAAAGCACTTCTGCAGGAAGCACGGTGAGAAGAAGTGGAAATGTGATAAGTGCTCTAAGAAATATGCAGTTCAATCTGATTGGAAAGCCCATTCCAAAACCTGTGGCACTAGGGAGTATAGATGTGACTGTGGAACCCTCTTCTCAAGGAGGGACAGTTTCATAACCCACAGAGCCTTCTGTGATGCACTAGCAGAAGAGAATGCAAGATCCATCACCACCAACAACATAAACCTCCAAACCCAATTCAATCCCCAACAAAACAACAACAACAACCAAAATTTCAACCTTATTAGACCAGAATTATTACTACCCCCATGGCTTGGCCCACAAAACAACCCTTACCATCATCATCAACAAGGCCAACACCCAAGCCTACATAACACCCTAAACCCGAACCCTAACCCTAGGTTCGGCCCCACAATTCAGCCTACTCCTGCCTCACCTCACATGTCAGCAACAGCTTTACTGCAGAAAGCAGCTCAAATGGGTGCAACCATTAGCAGCAGCAGTACCAGAAGTAGTACTACTACTGCTGCTGCCTCTGCGCCGAACTCTGCCTCTGCCTCAATTGCCATGATTAGGCCCCACCACCACCAACAACAAGGTCACGTGACTGCTGATCCTGCTGGTCACGTGACTACTGATCCTGCTGGCAATAGTAACAACTTTGGTTTGAATTTGTCCTCACATCATCATGATCATAATCAAGACAAATTCACTAGTACTATTTCTAATACTACTACTAGTACTAGTACTAGTATAGGGTTAATTGGAGGAAATTGTTCTTCTGAATTATTGGTACAACCATTTGGTTCATCAATTCTTCTTCAAGATGTTGCTATGATGAACCCCCCTTTCTCTTCTGCCTCTGGTTCTTCTGGGTTTGATGGAATAACTACTACTTTTGAGGATGATTGCAATTTATTTTTGCATAATGACACATCAATTTCGAAGACTAGCGGCGACGAAGGTGGTCGCGGCGGTGGTGGTGGTGGAAATAATGAAAAAGGGTTGACTAGGGATTTCTTGGGACTTAGGTCATTCTCTCATAGTGACATTCTCAGAATTGCTGGTATTGAAAATTGCATTAGTGGGAATCAACAAAACCACCAATCTCAAAAGGCATGGAAAGCACAGAGGGGGTACGTAACAGTCGCGCGCATCATCATCTCCGTCCACGGTCATCGGCCTTCCAAACCAGGATCGTCTTCCACCATCATCGGCCACAAACCACCATCATCTTCATCCACAAACCACCATCATCGTCCACAAACCACCATAATCTTGTGGATGTATAGCATCAACATCACGCCACAGGTCCGTCATTATCGTCCCTCCATCACGCCAGAATTCCCTCACACCAGAATTCCATCAACACCGGAACTCCATCACCGCCAGTACTGCATCACCGCCGGAGCTCCATCACCGCCAGATGCATGTGTGACCGACATTCCTCAATTAGGAATGCGTTTTGGGAACGACGATAAAGTTGTTGAATTTTACCAAGAATATGCCACAAGAATAGGTTTTACGTTTAAGAGACGGACAACAAAGTTGTAA 2052 0.4454 MTKDLMLYQDLEVQQEVDENMSNLTCASNEGTNNSVSSGIGISNNNYSQHQQQQQYFVSTTTTHDEPPKRKRNLPGNPDPDAEVIALSPKSLLATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRANKDGIIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEENARSITTNNINLQTQFNPQQNNNNNQNFNLIRPELLLPPWLGPQNNPYHHHQQGQHPSLHNTLNPNPNPRFGPTIQPTPASPHMSATALLQKAAQMGATISSSSTRSSTTTAAASAPNSASASIAMIRPHHHQQQGHVTADPAGHVTTDPAGNSNNFGLNLSSHHHDHNQDKFTSTISNTTTSTSTSIGLIGGNCSSELLVQPFGSSILLQDVAMMNPPFSSASGSSGFDGITTTFEDDCNLFLHNDTSISKTSGDEGGRGGGGGGNNEKGLTRDFLGLRSFSHSDILRIAGIENCISGNQQNHQSQKAWKAQRGYVTVARIIISVHGHRPSKPGSSSTIIGHKPPSSSSTNHHHRPQTTIILWMYSINITPQVRHYRPSITPEFPHTRIPSTPELHHRQYCITAGAPSPPDACVTDIPQLGMRFGNDDKVVEFYQEYATRIGFTFKRRTTKL* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0505 683 MobiDBLite consensus disorder prediction 24 82 - -
Aev09g0505 683 Gene3D Classic Zinc Finger 95 197 - -
Aev09g0505 683 MobiDBLite consensus disorder prediction 276 299 - -
Aev09g0505 683 SMART c2h2final6 98 120 IPR013087 -
Aev09g0505 683 SMART c2h2final6 176 196 IPR013087 -
Aev09g0505 683 SMART c2h2final6 141 171 IPR013087 -
Aev09g0505 683 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 43 525 - -
Aev09g0505 683 MobiDBLite consensus disorder prediction 24 63 - -
Aev09g0505 683 MobiDBLite consensus disorder prediction 561 585 - -
Aev09g0505 683 MobiDBLite consensus disorder prediction 558 585 - -
Aev09g0505 683 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 43 525 - -
Aev09g0505 683 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 120 IPR013087 -
Aev09g0505 683 SUPERFAMILY beta-beta-alpha zinc fingers 97 196 IPR036236 -
Aev09g0505 683 MobiDBLite consensus disorder prediction 327 385 - -
Aev09g0505 683 MobiDBLite consensus disorder prediction 327 352 - -
Aev09g0505 683 MobiDBLite consensus disorder prediction 272 315 - -
Aev09g0505 683 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0505 Aev-Chr9 4487578 4494657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0505 1 416 IDZ Gene Family AT1G55110 49.134 4.32e-123 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev09g0505 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0505 K25870 - tcc:108662622 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0505 09 4487578 4494657 Aev09g0505 09 4487578 4494657 ECH
Aev10g1670 10 19068811 19071009 Aev09g0505 09 4487578 4494657 PCT