Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0486 ATGGGGAATCAGAAGCAGAAGTGGACGCAGGATGAAGAAGACGCGCTTATCGCCGGCGTTGAAAAGCACGGTCCTGGGAAGTGGAAGAACATTCTCAAAGACCCACAATTCGCTCCATTCCTCACTTCACGTTCCAACATCGACCTCAAGGATAAATGGCGAAACTTGAGTGTCAGCAATGGTACTCAAGGGTCCAAAGAGAAATCTAGGGTTCCCAAAATCAAAGCTGCGGCTCCTGCTATCCCAGCTGGTAACAATGCTGTTGCTGTTGTGCAATACACTACTACTCCTGCTGCTGCTCCTGTGGCTCCTCAGGCCGAACCTTCCTCTGATGTTGCCGCGCGTGATCCTTCTGAAAATGACAGTGATGCCAAAAATCCTCTGCGGTGCGTGAACCTGTGTGGCCAACTCCATCTGGAGTACAATGCATTGGTTTTTGAAGCTCTATCAGCTCTTAAAGATGCTAACAGTGGTTCTGACTTAAATGCCATTATTACTTTCATTGAGAAAAAGCATAAGGTTCCTCAGAATTTCAGAAGGGCACTAAGTACAAGATTGAGGAGGCTTGTTAGTCAAGGGAAACTTGACAAGGTACAGAACAATTACGTGATAATTAAGGAATCCTCACCAGGGCCAAAATCGCCAAAATCACCACCACCAAAACAAAAGGATGCCTTGCCGCAAAGACAACCACCTCCACCCTCAGGTTTTGTGGCGTCCAACGAGACAGTAAAGGAAGCTGCTGAAGCTGCAGCCTACAGAATCGCCGATGCTGAAAGCAAATCATATTTAGCTGCAGAGGCAGTGAAGGAAGCAGAACGAATCACATTGCTGGCTGAAAATTCCGAGTCAATGTTACAGCTAGCTCAACAGATTTATGAACAATGTTCACGTGGCGAAGTTGTTCTCTTGGCGGCTTAA 921 0.4691 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSNGTQGSKEKSRVPKIKAAAPAIPAGNNAVAVVQYTTTPAAAPVAPQAEPSSDVAARDPSENDSDAKNPLRCVNLCGQLHLEYNALVFEALSALKDANSGSDLNAIITFIEKKHKVPQNFRRALSTRLRRLVSQGKLDKVQNNYVIIKESSPGPKSPKSPPPKQKDALPQRQPPPPSGFVASNETVKEAAEAAAYRIADAESKSYLAAEAVKEAERITLLAENSESMLQLAQQIYEQCSRGEVVLLAA* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0486 306 Gene3D - 8 81 - -
Aev09g0486 306 PANTHER TELOMERE REPEAT-BINDING FACTOR 4-RELATED 1 305 - -
Aev09g0486 306 MobiDBLite consensus disorder prediction 201 239 - -
Aev09g0486 306 MobiDBLite consensus disorder prediction 100 126 - -
Aev09g0486 306 SUPERFAMILY "Winged helix" DNA-binding domain 138 216 IPR036390 -
Aev09g0486 306 MobiDBLite consensus disorder prediction 212 234 - -
Aev09g0486 306 PANTHER SINGLE MYB HISTONE 4 1 305 IPR044597 GO:0003691
Aev09g0486 306 SUPERFAMILY Homeodomain-like 2 59 IPR009057 -
Aev09g0486 306 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Aev09g0486 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Aev09g0486 306 SMART h15plus2 135 201 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev09g0486 306 Gene3D - 136 224 IPR036388 -
Aev09g0486 306 SMART sant 4 59 IPR001005 -
Aev09g0486 306 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Aev09g0486 306 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 137 206 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev09g0486 306 Pfam linker histone H1 and H5 family 138 199 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev09g0486 306 CDD SANT_TRF 6 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0486 Aev-Chr9 4319310 4322138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0486 1 305 Single Myb Histone (SMH) Gene Family AT1G72740 43.607 4.85e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev09g0486 Linker_histone 1.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0486 K09422 - gmx:780537 346.665