Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0459 ATGGAAGGAGAGAGAGGTGGTAGTGATCATCATCATCATAGTTATGAGCTTCAAGTTTCATTCACAAACACACCTCAAGCAATCCATGAGATAGGTTTTGTTCAATTTGAAGAAAACCAAGTTCTTAGCTTCTTGGCTCCTTCTTCTCAATCCCAATCTTCTCAGCTCTCTCAATCTCTTAACGACGGCGGCGGAGGCGGTGGCAGCAACAATAGTACTACTACTGCCTCTGCCACCGCCGCATCCAACACCGCCGCCACCGCGATCGGGTTCACCCATAACGACCTTGTTGCAAGAACATCTTGGAATAGTGAACAGGTTCGAAATTTAGATCCAAAGGGTGTTAATAATAATAATGAAGAAAATTGCACTGGAAATTCTAGTGATGGAAGCAACACATGGTGGAGAAGTGGAGGATCAGAGAAGGGGAAGGTGAAAGTGAGGAGGAAGCTGAGAGAGCCAAGGTTTTGTTTCCAAACGAGAAGTGATGTTGATGTTCTTGATGATGGTTACAAATGGAGGAAATATGGCCAAAAAGTTGTCAAGAATAGCCTTCATCCAAGGTAA 567 0.4409 MEGERGGSDHHHHSYELQVSFTNTPQAIHEIGFVQFEENQVLSFLAPSSQSQSSQLSQSLNDGGGGGGSNNSTTTASATAASNTAATAIGFTHNDLVARTSWNSEQVRNLDPKGVNNNNEENCTGNSSDGSNTWWRSGGSEKGKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0459 188 ProSiteProfiles WRKY domain profile. 162 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev09g0459 188 Gene3D WRKY domain 154 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev09g0459 188 MobiDBLite consensus disorder prediction 53 78 - -
Aev09g0459 188 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 188 IPR044810 GO:0003700
Aev09g0459 188 MobiDBLite consensus disorder prediction 107 147 - -
Aev09g0459 188 SUPERFAMILY WRKY DNA-binding domain 159 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev09g0459 188 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 19 188 - -
Aev09g0459 188 MobiDBLite consensus disorder prediction 107 138 - -
Aev09g0459 188 Pfam WRKY DNA -binding domain 168 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0459 Aev-Chr9 4030758 4032773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0459 115 188 WRKY Transcription Factor Family AT2G44745 72.152 5.90e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev09g0459 WRKY 2e-06 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0459 09 4030758 4032773 Aev09g0459 09 4030758 4032773 ECH