Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0458 ATGACTCAAGAAGAACTTTTAGAAAGGTACAAGAATGATGATGTACCATTGGTTCAAGCTAACTTTGCTCAATCTCATTCTCAAAATGTGATTCAAGAAAGCAATAATCAGTTTCAGCATCAAAGAAATGGTGCTGCTTATGGTCGAAATGGTTTTTTTCGAGGACGGGGTCGCGACCCTTCACCTGCTGCCGCCACCATTGCCTTCGGCAGCATCGCCGCCGTCCACCACCGCATCGTGCAGCGCCGCCTCCACCACCTCCTTCACGAGAAGAAACAAATGGAGTCTTCAGGATTGGGGAAGAAAATTGAATCCCTAGATAACGCTGAAGAAGAAGATACTTCAGCAGATAACAAGAAATGCAGTAGTAAATTCTATGATGTCTATGGACCCCAAGCCAAGGCAGATATTGTTTTCAAGTCACCAGAAGATAATTCAACATTGAATCTTAATGACATTCAAGGACTTATAACTTGGGTGGTTGGGGAAGGATTTATGCCATCATGGGTTTTTATCAAGAATAAGCCTCTTATTCCCAAATTGGTTATGCTCTATATGCCATGTCTGGATGCGGCTTTGTTCCTATCAGAATCTAAAGTTCTTGCCAGTTTAAAAAAGTTATGCGGAAAACCAAGGCCAGTCCTGGCTCTTAGCTGCGTATCAGATGGTATGCAGACAATAGATGCTCTGCTAACATGCAAGGTGAAAAGAAAGAGGGATCAAAATAATCCAATTATGAGGAAATCTACTATGATATCTCAACAAGAAGAAGGCCATCATGGTACAGACAGTGTATCATTTAAGGATATTACAAAAGATATTCCTTTCCCTGTTACGTACTATACACTAACAGAGAAAGAACTGGAAGAGAATGGATATTCTGTTAATCAGCCAGATTTTCTTTCGACTTTGCCTTCTCCTTTGGGATCTTCCTTTCATGAGATGTTAGCACTTGATTGTGAGATGTGCATCACAAGTGAGGGTTTTGAGTTGACAAGAGTTACTCTAGTGGATATCAAAGGACAGGTTTTGATGGACAAATTGGTTAAGCCATCAAATACTATCACTGATTACAACACAAGATTTAGTGGTATAACATCTGAGATGTTAGATGGGGTGACAACAAGTCTGAGAGATATTCAGGAAGAATTTCTGAAGCTGGTTTACAAGGAGACTATCCTTGTTGGGCATTCTATGGAAAATGATTTATTAGCATTGAAGATATCCCATGACTTGGTCATCGACACAGCAGTATTGTACAAACACCCACGGGGATCATCGTATAAAACAGCTTTGCGGTTTCTTTCTAAGAAATTCCTTTCGAGGGAGATACAGCAATCAGTGAATGGACATGACAGCGTTGAAGATGCTAGAGCTACCATGGAATTGGCACTATTAAAGATCAGAAATGGGCCTGACTTTGGTTCCCCTCCATCCTTTACGCGGAAGAAGTTCCTTTCTATTTTGGGCGAGTCCGGCAAAAAATCCTCCTTGATCGATGATATATCTATCGTAAAACGATATGCCTCCGAGTCCTCTAATTCAATTCCAGTGACCTCTGATGATGAAGCACTTAAAAAGGCCCAGAAGGAGGTGAAGAATGAGAAGGTACATTTTGTTTGGACTCAGTTCTCTGAGTTGCAATCATACTTCAAGAAACAAGCCGAAGACTCGGAGGAATTGAATAAAAGACTCGCAGAGATGATGGCTTTATTTACATGTCGGAAGGATCATGACAAAGGTAAAGGTTTTAAGCTGCGTGCATCGGCTGAACTGAAGGAAGTTCTGGCCCGCATGGATGCTAGAATTCGCAATCTGTATTCGTCGTTGCCCACAAACACTATGTTCATCATATGCACTGGTCATGGAGACACAGCAATTGTTCGCAGGCTGAGGAAAATGCTTGCTGAGCAGAGTGAAAGTAATATGTGTAGAGAGAAGATTGTAGACGTCTTGGAAGAGGTTCAGGCTAGAGCTGAGGTAGCTTTGTGTTTTGTAAGTGTAAAGCATTGA 2013 0.4153 MTQEELLERYKNDDVPLVQANFAQSHSQNVIQESNNQFQHQRNGAAYGRNGFFRGRGRDPSPAAATIAFGSIAAVHHRIVQRRLHHLLHEKKQMESSGLGKKIESLDNAEEEDTSADNKKCSSKFYDVYGPQAKADIVFKSPEDNSTLNLNDIQGLITWVVGEGFMPSWVFIKNKPLIPKLVMLYMPCLDAALFLSESKVLASLKKLCGKPRPVLALSCVSDGMQTIDALLTCKVKRKRDQNNPIMRKSTMISQQEEGHHGTDSVSFKDITKDIPFPVTYYTLTEKELEENGYSVNQPDFLSTLPSPLGSSFHEMLALDCEMCITSEGFELTRVTLVDIKGQVLMDKLVKPSNTITDYNTRFSGITSEMLDGVTTSLRDIQEEFLKLVYKETILVGHSMENDLLALKISHDLVIDTAVLYKHPRGSSYKTALRFLSKKFLSREIQQSVNGHDSVEDARATMELALLKIRNGPDFGSPPSFTRKKFLSILGESGKKSSLIDDISIVKRYASESSNSIPVTSDDEALKKAQKEVKNEKVHFVWTQFSELQSYFKKQAEDSEELNKRLAEMMALFTCRKDHDKGKGFKLRASAELKEVLARMDARIRNLYSSLPTNTMFIICTGHGDTAIVRRLRKMLAEQSESNMCREKIVDVLEEVQARAEVALCFVSVKH* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0458 670 MobiDBLite consensus disorder prediction 91 115 - -
Aev09g0458 670 PANTHER LD29573P 110 655 - -
Aev09g0458 670 SMART exoiiiendus 314 473 IPR013520 -
Aev09g0458 670 CDD REX1_like 316 465 IPR034922 -
Aev09g0458 670 SUPERFAMILY Ribonuclease H-like 315 468 IPR012337 -
Aev09g0458 670 Pfam Exonuclease 317 463 IPR013520 -
Aev09g0458 670 Gene3D - 311 473 IPR036397 GO:0003676
Aev09g0458 670 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 110 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0458 Aev-Chr9 3993407 4006162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0458 305 463 C2H2 Transcription Factor Family AT2G48100 28.495 1.24e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0458 K14570 - gmx:100802793 932.169