Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0417 ATGTGTTTTTATGAAGAACCCATGTGTCTTTATCATGTCTTTATTAGGGTTTTTGCGTTTTGCGGCACTTACCCAGAACTCCCTCCGCCATGGCTGAACAACTCGAAGAAATCTGGGAAGGGAAAGAGGCCTGGAAAAGGCGGTAACCGCTTCTGGAAATCCATTGGCCTTGGATTTAAGACTCCCAGAGAAGCCATTGAAGGAACCTACATTGACAAGAAATGCCCCTTCACTGGCAATGTTTCCATCAGGGGCCGCATCTTGGCTGGAACATGCCACAGTGCTAAGATGACAAGGACTATCATTGTTAGGAGGAATTATCTTCACTTCATTAAGAAGTATCAGAGATATGAGAAGAGGCATTCAAATATTGCTGCGCATATATCACCTTGCTTCCGTGTGAAGGAGGGAGATCATGTTATCATTGGGCAATGCAGGCCAATCTCGAAGACAGTGAGGTTCAATGTGTTGAAAGTGATTCCGGCTGGATCTTCTAGCGGCGCGAAGAAGGCATTTACCGGAATTTAA 528 0.4527 MCFYEEPMCLYHVFIRVFAFCGTYPELPPPWLNNSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIAAHISPCFRVKEGDHVIIGQCRPISKTVRFNVLKVIPAGSSSGAKKAFTGI* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0417 175 Pfam Ribosomal_S17 N-terminal 33 88 IPR032440 -
Aev09g0417 175 Pfam Ribosomal protein S17 90 158 IPR000266 GO:0003735|GO:0005840|GO:0006412
Aev09g0417 175 TIGRFAM uS17_arch: ribosomal protein uS17 70 159 IPR028333 -
Aev09g0417 175 PANTHER BNAA06G38660D PROTEIN 22 174 - -
Aev09g0417 175 ProSitePatterns Ribosomal protein S17 signature. 137 149 IPR019979 GO:0003735|GO:0005840|GO:0006412
Aev09g0417 175 Gene3D - 29 174 - -
Aev09g0417 175 PRINTS Ribosomal protein S17 family signature 137 147 IPR000266 GO:0003735|GO:0005840|GO:0006412
Aev09g0417 175 PRINTS Ribosomal protein S17 family signature 104 127 IPR000266 GO:0003735|GO:0005840|GO:0006412
Aev09g0417 175 PRINTS Ribosomal protein S17 family signature 147 154 IPR000266 GO:0003735|GO:0005840|GO:0006412
Aev09g0417 175 SUPERFAMILY Nucleic acid-binding proteins 84 163 IPR012340 -
Aev09g0417 175 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 22 174 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0417 Aev-Chr9 3574697 3576094 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0417 29 175 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 85.714 2.25e-82 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0417 K02949 - gmx:100500186 275.789