Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0342 ATGCTTCGGTTTTTTACATCTGGGTCAAATCTTTTTCAGTCATTCTCAAACCATATAGGCATAAAAGCATTGCAAGTGTTCACGCACGCCACCTATTCGACCATTTGCCTGACCCAAATCAAAGCTAAAGAGCAAGAAACTTCAAAGCAATCAAAGGTTGATGCTACTGAAGTTTTGAGTAAATGGGGTTGTTGTGATGATGACTTGATGAGAATATTCTCACGTTGCCCCTCTTTGCGCAATTCTGATGGGGCGCAAATTCAATCAAAGCTCTCTCTGCTGAGTTCCTTGGGGTTAGGGGCATCTGAGCTTGTGAAGATCATCAACTGCAGGCCCCGGTTTTTCCAGTCCCGGATTAACCAATGTTTCGACGAGAGGCTTGCTTATCTTGTGTCATTGTTTGAGTCAAAGGAACTGCTTAACAAGGTCATTGTGAGGAACCCTTCACTCTTGGTATATGACAATCGCGACGACATCAAAGCCACCTTTGAACTCTATGAGGAGTTGGGCGTTAAGAAGAGGGACTTGATTCAGATGATCCTCCTGCGGCCAACGATCATTTCGAGGACTTCTTTCAATGATGAGAAGATGGAGTACATACGCAGGACAGGGGTTTCCGAGGATTCAAAGTTGTATAAGTATGTGGTGACACTGATAGGCATCTCGCGCGAGGAAACAATTTGCGATAAGGTGGCGAACCTGGCAAAATTCGGTCTCTCTGATGATGAGATCTTTGGCCTTTTAGGAAGGTCTCCTCATGTTATTACATTGTCCACTGATAAGGTTCAGAGGAACATGACTTTCGTCGTGGCGACTATGAAGCTTGATGCTAAGACAATCCTAAAGAGCCCATTTCTCTTGTATGCTAATATGGATAAAGTTCTGAAGCCACGTTTTCTGCTACTGATGAAGTTACAAGATATGGATTCTAAGGTGCAAATCACACAACCTGCAATACTAAGTGCAATGAGGATGAAGGAGCAGAGATTCTTAGATTTGTATATCAAATGCCATGAGAAGGAAGTTGCCGACGAGTTAATGGAGTTCTATAAAAGATCAAAAGAGGTGAAGAGGTTAGCAGTGTCATCAAAGAGGGCCATTCGTAGAGGATTCCCTTTTTGA 1122 0.4323 MLRFFTSGSNLFQSFSNHIGIKALQVFTHATYSTICLTQIKAKEQETSKQSKVDATEVLSKWGCCDDDLMRIFSRCPSLRNSDGAQIQSKLSLLSSLGLGASELVKIINCRPRFFQSRINQCFDERLAYLVSLFESKELLNKVIVRNPSLLVYDNRDDIKATFELYEELGVKKRDLIQMILLRPTIISRTSFNDEKMEYIRRTGVSEDSKLYKYVVTLIGISREETICDKVANLAKFGLSDDEIFGLLGRSPHVITLSTDKVQRNMTFVVATMKLDAKTILKSPFLLYANMDKVLKPRFLLLMKLQDMDSKVQITQPAILSAMRMKEQRFLDLYIKCHEKEVADELMEFYKRSKEVKRLAVSSKRAIRRGFPF* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0342 373 Gene3D Transcription termination factor 3, mitochondrial 116 344 IPR038538 -
Aev09g0342 373 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 373 - -
Aev09g0342 373 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Aev09g0342 373 SMART mt_12 177 206 IPR003690 GO:0003690|GO:0006355
Aev09g0342 373 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Aev09g0342 373 SMART mt_12 277 309 IPR003690 GO:0003690|GO:0006355
Aev09g0342 373 SMART mt_12 209 240 IPR003690 GO:0003690|GO:0006355
Aev09g0342 373 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Aev09g0342 373 SMART mt_12 70 100 IPR003690 GO:0003690|GO:0006355
Aev09g0342 373 PANTHER CGI-12 PROTEIN-RELATED 21 373 IPR003690 GO:0003690|GO:0006355
Aev09g0342 373 Pfam mTERF 129 331 IPR003690 GO:0003690|GO:0006355
Aev09g0342 373 Pfam mTERF 57 149 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0342 Aev-Chr9 2910840 2911961 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev09g0342 mTERF 1.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0342 K15032 - gmx:100799629 486.108