Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0339 ATGGAAAACCAATTCTTTCTAAATGGTGGGGTGCCCCATCATCCAATTCACTTTGAATCAACAACTCCACAATCACACTTTTCTTCAATGCAAACTTGGAATCATCATCATCATCATCATCAACTCTCATCATCATCATCATCACCCATGGAAATTCAACAACCAACACAAGAAAGCTTCTACAACAACCCAGATCATCAAAACCTTCACTTTGATTCAGCACTAAGCTCAATTGTCTCATCCCCATCAGCATCAAATTCCAACAACAACGACAACAATAACTTTGTGATCAGAGAATTTGTTGGGACATTAGGAACAATTGGAAGCTCTGGTGAGATCTCACCACATAATTCTCATCAACCACTAGTCTATAACAACATTCCTTCATTGGGGAATAACAACAAACACTTGGTGAGCGAAAACAACAACAACATTAAACCAATTGCTCTGAATTCAAGTGTTGCTGAATTCTCAGCTGATCCTGGTTTTGCTGAGAGGGCTGCAAAATTCTCCTGTTTTGGGAGCCGGAGTTTCAATGGCAGGACTACTCATCAGATTGTGCCCAACAATGCCATCGCCGCCGTCGCCGCCGCCGCCGAGTTAACTCAGAGATCTAGAACTGTTACTGCTCCGGCTATGGAGAATAATGGGAGGATAAGTAGAGTCTCAAGTAGCCCATCACTGAAAACACTTGGATCTCAAATGGTTGCAATGGAGAACAACAATAATTGTTCTCCATTGCAAGAGAGAATTGAAGTTTCAAATTCTCAAGATGAATCTACAATCTCAGAGCAAGCACCAAATGGTGAAACAGGGTTGAAACCTTCCCCTGACATGAATTCCAGGAAAAGAAAAGCTTCTTCCAGGGGAAAAGCCAAAGATGCTTCAACCCCTTCCAATCCTACCAAGGGTGTTGAAGGTGGTGAGGACTCAAATGCAAAGAGAATCAAGCCAAATGATGGTGATGAAAATAATAATAATAATAATAATAATAATGGAAGTGTGAAGGTAGAAGAAGATTCCAAAGGTGAAGAAAAACAGAACAACAAGAGCAACAACTCAAAACCTCCTGAGCCACCAAAAGATTACATTCATGTCAGAGCAAGAAGGGGCCAAGCCACTGACAGCCATAGCCTTGCAGAACGGGTACGGAGGGAGAAAATCAGTGAGAGGATGAAGCTTCTCCAAGATCTTGTACCAGGTTGCAATAAGGTCACTGGTAAAGCACTTATGCTTGATGAAATTATAAACTATGTTCAGTCATTGCAAAGGCAAGTTGAGTTCTTGTCTATGAAATTGGCAAATGTTAACACAAGGATGAATCTTAGTATTGAAAGCCTTATCCCAAAAGATATATTTCAATCAAATCAATCTTTGGCAAACCCAATTAATTTTCCATTAGATTCCTCAGCAACACCCTTTTATGGGCACCAATCCCAGCAAAACCCAGTTATCCACAATGACATTATTCCTAATGGAACTGTGTCCCACAACTCAGTGGACCCTTTATTAGATACTTCCTTGTGCCAAAATCTTGGTTTGCAGTTACCTCCTCTTAATGGATTCAATGAAATTGGATCTCAGTATCCATTGACATTCTGTGAGGATGATCTACACACCATTGTTCAGATGGGGTTTGGCCAAGCTACAAACATGAAAACACCAATAGAATCCCCAACTTTCAACGGTTCAAATCAAGTATCACAGATGAAAGTTGAGCTCTGA 1725 0.4064 MENQFFLNGGVPHHPIHFESTTPQSHFSSMQTWNHHHHHHQLSSSSSSPMEIQQPTQESFYNNPDHQNLHFDSALSSIVSSPSASNSNNNDNNNFVIREFVGTLGTIGSSGEISPHNSHQPLVYNNIPSLGNNNKHLVSENNNNIKPIALNSSVAEFSADPGFAERAAKFSCFGSRSFNGRTTHQIVPNNAIAAVAAAAELTQRSRTVTAPAMENNGRISRVSSSPSLKTLGSQMVAMENNNNCSPLQERIEVSNSQDESTISEQAPNGETGLKPSPDMNSRKRKASSRGKAKDASTPSNPTKGVEGGEDSNAKRIKPNDGDENNNNNNNNNGSVKVEEDSKGEEKQNNKSNNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLANVNTRMNLSIESLIPKDIFQSNQSLANPINFPLDSSATPFYGHQSQQNPVIHNDIIPNGTVSHNSVDPLLDTSLCQNLGLQLPPLNGFNEIGSQYPLTFCEDDLHTIVQMGFGQATNMKTPIESPTFNGSNQVSQMKVEL* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0339 574 Coils Coil 419 439 - -
Aev09g0339 574 MobiDBLite consensus disorder prediction 1 67 - -
Aev09g0339 574 MobiDBLite consensus disorder prediction 322 336 - -
Aev09g0339 574 SMART finulus 378 428 IPR011598 GO:0046983
Aev09g0339 574 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 370 440 IPR036638 GO:0046983
Aev09g0339 574 MobiDBLite consensus disorder prediction 251 270 - -
Aev09g0339 574 MobiDBLite consensus disorder prediction 251 363 - -
Aev09g0339 574 PANTHER BHLH TRANSCRIPTION FACTOR 2 567 - -
Aev09g0339 574 MobiDBLite consensus disorder prediction 43 67 - -
Aev09g0339 574 MobiDBLite consensus disorder prediction 292 306 - -
Aev09g0339 574 Gene3D - 369 445 IPR036638 GO:0046983
Aev09g0339 574 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 372 422 IPR011598 GO:0046983
Aev09g0339 574 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 567 IPR024097 GO:0006355
Aev09g0339 574 MobiDBLite consensus disorder prediction 337 351 - -
Aev09g0339 574 CDD bHLH_AtBPE_like 362 447 - -
Aev09g0339 574 Pfam Helix-loop-helix DNA-binding domain 376 423 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0339 Aev-Chr9 2860349 2864215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0339 1 528 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 40.000 1.00e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g0339 HLH 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0339 - - gmx:100801233 616.305