Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0294 ATGGATGCAAGATCAAGAAATTATGAGAATGATTCTCATAATAATAATAATAAGATGTTATTGGATTTGATTCAATTTAGCAAAGAAGAGAGGGGATTGGAGCTTAGACTTGGTCCACCTGGTGATGAACAAGATTGGTCTCATCATCACAATGAAAATAATAACAAGAGAGAAAGAAATGATGATTCTTCATCACTCTGTTTTGGTCACTTATCATCACACAAAATTCATCACCACCAGCTTAATCAACACAAGGATAAGGCTAAAGATTCATCATCATTTCTTGAACTCAAATCAAGTACACAGAATATGCATAGAGAAGAAGAAAAGAAACAATTCTCACCCTCTTCTGCAAATGATGCAGCTGTCCCTAAAAGCTCTCAGAAAAGAAGTAGTGCAGCTGGTCCAGTTGTGGGTTGGCCTCCAATTGGTTTATTCAGGAAGAATAACAACATTACAAGTACTGGAAGCTCTTCTAAGCACAAACCTCAACACAATAATCTTCTTCATCAAGGTCCCAATAATAATAAGGATAATAATAGGGAACATGTTCACAACAACAATATTCAAATAATTAACAAAGGCTTGTTTGTGAAGATTAATATGGATGGAGTTCCAATTGGTAGAAAAATAGACATCAATTCTTGTGGCAGCTATCAGAAACTTTCCTCTGCTGTTTATGACCTCTTTAGAGGCCTCTTTAAAGAAAGAGATTCCTCTGGTGGTGGAATTCAGAAGGAGGAAGAAGAAGAGAAAGTGATTAGGGGTCTATTAGATCATAGAAATGGCGAATATACCCTTTCTTTTCAGGATCATCAAGGACATTATATGCTTGTTGGGGATGTCCCATGGAACATGTTTGTATCAACAGTGAAGAGATTGCGAGTGTTGAAGAGTTCTGATCTCTCTGCTATTTCCCTTGGTAGTAAGCAAAAGGCACATACATCACTTGATAAGGCAATGAAATGA 969 0.3664 MDARSRNYENDSHNNNNKMLLDLIQFSKEERGLELRLGPPGDEQDWSHHHNENNNKRERNDDSSSLCFGHLSSHKIHHHQLNQHKDKAKDSSSFLELKSSTQNMHREEEKKQFSPSSANDAAVPKSSQKRSSAAGPVVGWPPIGLFRKNNNITSTGSSSKHKPQHNNLLHQGPNNNKDNNREHVHNNNIQIINKGLFVKINMDGVPIGRKIDINSCGSYQKLSSAVYDLFRGLFKERDSSGGGIQKEEEEEKVIRGLLDHRNGEYTLSFQDHQGHYMLVGDVPWNMFVSTVKRLRVLKSSDLSAISLGSKQKAHTSLDKAMK* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0294 322 Gene3D - 190 311 - -
Aev09g0294 322 MobiDBLite consensus disorder prediction 35 64 - -
Aev09g0294 322 MobiDBLite consensus disorder prediction 115 133 - -
Aev09g0294 322 MobiDBLite consensus disorder prediction 35 182 - -
Aev09g0294 322 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 25 313 IPR003311 GO:0005634|GO:0006355
Aev09g0294 322 MobiDBLite consensus disorder prediction 147 175 - -
Aev09g0294 322 ProSiteProfiles PB1 domain profile. 195 299 IPR000270 GO:0005515
Aev09g0294 322 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 25 313 - -
Aev09g0294 322 SUPERFAMILY CAD & PB1 domains 191 296 - -
Aev09g0294 322 Pfam AUX/IAA family 33 305 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0294 Aev-Chr9 2425479 2427831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0294 199 310 B3 DNA Binding Superfamily AT4G23980 29.464 1.33e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Aev09g0294 AUX_IAA 7.7e-61 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0294 K14484 - gmx:100804593 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0294 09 2425479 2427831 Aev10g1622 10 18791268 18794002 ECH
Aev09g0294 09 2425479 2427831 Aev09g0294 09 2425479 2427831 ECH
Aev10g1622 10 18791268 18794002 Aev09g0294 09 2425479 2427831 PCT