Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0274 ATGGAAGTGCCGGAATACTTCGTCGGTGGCTATTACGGCGCCGGAGGGGACCAATTCTCGCCGGAGAAGAGGCACGGTGGTGGAGACCAGAAACATGGTGGCGGTGTCGGTGGTGAGCCGTTCGCCATTGATGACTTGCTTGACTTCTCCAACGCCGACGCCATCATGTCCGACGGGTTCTTCGACAATGTTGCCGGGAATTCTGCGGATTCCTCCACCGTCACCGCCGTTGACAGCTGCAACTCGTCGATCTCCGGCGGTGATAATCATTTCCCCGCCGGCATTGTCCCCCGCGCATTCTCCTCTGGCGATCCTCAATTCTCTGGCGGAGAGCTATGCGTACCGTACGATGATATGGCGGAACTGGAGTGGCTCTCGAACTTCGTGGAGGACTCATTCTCCGCCGAGGAGGAGCTGAAGACGCTGCAGCTTCTCTCCGGCGGTGCCGCCGCCGCCGCGTTCAACGGCGTAAAGCCGCAGACTCCGGAGTCCTCCTCCTCCTCCGATACGCTCCCTTCGCCGTTCGACACCGCGCGGAACGCGCCGTTCCTCCTCCATCCCGAAACGCCGCTCCCAGGCAAAGCGCGCAGCAAGCGCTCACGCGCCGCTCCGGGGGACTGGTCCACGCGCCTCCTGCACCTCGCAACACCGCCGCCATCCGCGGCGGATCAAAAACCACCGGTGAAACCAGCTCCGATGACAAAGAGAAGAGAAGCGAATGCAGAGTGTTCAGGAAGGAAGTGTCTCCATTGTGGCGCGGAGAAAACGCCGCAATGGCGCACTGGGCCCATGGGCCCAAAGACACTATGCAATGCGTGCGGCGTGAGGTTCAAATCGGGCCGGTTAGTACCCGAGTACAGGCCCGCTGCGAGCCCAACGTTTGTTTCAACGAAGCACTCGAATTCTCACCGGAAGGTTCTGGAACTTCGGAGGCAGAAGGAGTTGCAGCGGCAACACCATCAGCATCAGCAAAACCTGCTGAGTCAACATCATCATCATCATCATGGTTCGTTTTTCAACGTATCCAACGGTGGAGATGAATTCTTGATCCATCATCATCATATTGGACCTGATTTTAGGCATGTTATCTAG 1092 0.5842 MEVPEYFVGGYYGAGGDQFSPEKRHGGGDQKHGGGVGGEPFAIDDLLDFSNADAIMSDGFFDNVAGNSADSSTVTAVDSCNSSISGGDNHFPAGIVPRAFSSGDPQFSGGELCVPYDDMAELEWLSNFVEDSFSAEEELKTLQLLSGGAAAAAFNGVKPQTPESSSSSDTLPSPFDTARNAPFLLHPETPLPGKARSKRSRAAPGDWSTRLLHLATPPPSAADQKPPVKPAPMTKRREANAECSGRKCLHCGAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSTKHSNSHRKVLELRRQKELQRQHHQHQQNLLSQHHHHHHGSFFNVSNGGDEFLIHHHHIGPDFRHVI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0274 363 ProSitePatterns GATA-type zinc finger domain. 248 273 IPR000679 GO:0006355|GO:0043565
Aev09g0274 363 MobiDBLite consensus disorder prediction 158 175 - -
Aev09g0274 363 Gene3D - 242 292 IPR013088 GO:0006355|GO:0008270
Aev09g0274 363 SMART GATA_3 242 292 IPR000679 GO:0006355|GO:0043565
Aev09g0274 363 PANTHER GATA TRANSCRIPTION FACTOR 9 1 363 - -
Aev09g0274 363 Pfam GATA zinc finger 248 281 IPR000679 GO:0006355|GO:0043565
Aev09g0274 363 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 245 305 - -
Aev09g0274 363 PANTHER GATA TRANSCRIPTION FACTOR 1 363 - -
Aev09g0274 363 CDD ZnF_GATA 247 294 IPR000679 GO:0006355|GO:0043565
Aev09g0274 363 ProSiteProfiles GATA-type zinc finger domain profile. 242 278 IPR000679 GO:0006355|GO:0043565
Aev09g0274 363 MobiDBLite consensus disorder prediction 313 336 - -
Aev09g0274 363 MobiDBLite consensus disorder prediction 156 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0274 Aev-Chr9 2236203 2237741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0274 36 363 C2C2-Gata Transcription Factor Family AT4G32890 46.199 4.66e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev09g0274 GATA 4.9e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0274 - - aip:107619293 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0274 09 2236203 2237741 Aev09g0274 09 2236203 2237741 ECH