Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0260 ATGATGGCTGGAAACCCTAATAATTGGTGGAGCATGATGAGCAATACATCACCTTTGATCCCTCCACAATATGTGCTTGGATCTTCTCCTTCAATAATTCCTTTTAATCCTTTGACTGAAATTCCAGAACCTTCTCAATCTTCTTGGAGCCAACTTCTTTTCACTGGGGTACCAGGAGAAGAAGAGAGGCTTGGATTCACAACTCATTTCCAATCATCAAAAAAGTTGGTAGAGAACAACAATAATTGGGATGATGATCATAATAATAATATCTTCATCAATAATAATAATAATCCATCACAAGCAAGAGTACTCCCTAATAATATTATTGATGTAATAAAGCATGAAGTTTCCCAAAGTGGTAGTAGTAATAACTTATTATTATATGGCCATAGCCATGAGGAATTTCAAGCTTCATTATCATCATCTAATTGGTCACAAAATAATAATAACAATAATAATAATAATATGGTGGTGGTGCCAGTTTCTTCTTCACCTAGGTCATCAAGTGTCACAAGTCTCAGCAGCAATAACAACAATAATTTGTTGGATTTCTCTTATAACAACAACAACAAGGAAGATCATAATAATAGGAAGAATCAATTGCCATTATTTGCCACTTCTGAGGGTAATAATAACACAACCACAACTGGAGTTTGTAATAAGAAGCCTAGGGGGCAACCATCTTCAAGCCAACCACCTTTAAAGGTGAGAAAGGAGAAGCTTGGTGACAGAATAACAGCACTTCACCAGCTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTGTTGTTAGAAGCCATTGGATACATCAGATTCCTGCAGACTCAAATTGAGGCACTGAGTTCTCCATACTTGGGCAATGGATCAAAAAGCAATATGAGGAATCAACACTATGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCGGGTCAGCTGTTGAATGACACTGGCCTGAAAAGAAAGGTAGCTCCAAGCCAGGATGCAAAAGATAAGCCAAAGGACTTAAGGAGCAGAGGATTATGCTTGGTTCCAGTGTCTTGCACTCAACATGTTGGAAATGAAAATAATATTGGAGCTGATTATTGGGCACCTGCTTATGGTGGTGGATTTTAG 1125 0.3804 MMAGNPNNWWSMMSNTSPLIPPQYVLGSSPSIIPFNPLTEIPEPSQSSWSQLLFTGVPGEEERLGFTTHFQSSKKLVENNNNWDDDHNNNIFINNNNNPSQARVLPNNIIDVIKHEVSQSGSSNNLLLYGHSHEEFQASLSSSNWSQNNNNNNNNNMVVVPVSSSPRSSSVTSLSSNNNNNLLDFSYNNNNKEDHNNRKNQLPLFATSEGNNNTTTTGVCNKKPRGQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQTQIEALSSPYLGNGSKSNMRNQHYVHGERNSVFPEDPGQLLNDTGLKRKVAPSQDAKDKPKDLRSRGLCLVPVSCTQHVGNENNIGADYWAPAYGGGF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0260 374 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 44 359 - -
Aev09g0260 374 MobiDBLite consensus disorder prediction 200 234 - -
Aev09g0260 374 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 226 275 IPR011598 GO:0046983
Aev09g0260 374 PANTHER OS05G0228400 PROTEIN 44 359 - -
Aev09g0260 374 MobiDBLite consensus disorder prediction 140 235 - -
Aev09g0260 374 CDD bHLH_AtbHLH_like 236 283 IPR045239 -
Aev09g0260 374 Gene3D - 236 297 IPR036638 GO:0046983
Aev09g0260 374 MobiDBLite consensus disorder prediction 140 190 - -
Aev09g0260 374 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 236 287 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0260 Aev-Chr9 2108932 2114881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0260 137 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 53.403 9.87e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0260 - - aip:107617848 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0260 09 2108932 2114881 Aev09g0260 09 2108932 2114881 ECH