Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0232 ATGGATTTTTGGCCAGAGTTTCTTGCAAGTAGTTGGGGTAAGGAATTTATAGCAGGTGGATTTGGAGGCATTGCTGGAATAGTTTCTGGTTATCCATTGGATACACTGAGAATAAAGCAACAGAGTTCAAAAACTGGCTCTGCATTTAGTATCCTTAGGAATATGGTTTCTAGGGAAGGACCAGCTTCTTTGTACCGGGGCATGGCTGCTCCTTTGGCTTCTGTTACCTTTCAGAATGCTATTGTTTTCCAAACCTATGCAATCCTCTCAAGAGCATTTGACAAAACAGTTTCACCTAAAGACCCTCCTTCCTACAAGGGTGTTGCATTAGGAGGAATTGGCACAGGTGCACTCCAAAGCATATTACTTTCACCAGTAGAATTGGTCAAAATTCGCCTTCAACTGCAAAACACAAACAACTTAACAGCACCACAAAAGGGTCCTATAAATGTTGCAAAGAGCATATGGAAACAAGAGGGACTTAGAGGAATCTATAGAGGACTTAGCATCACTGTTCTAAGGGATGCACCTGCACATGGCTTCTACTTCTGGACATATGAATATATGAGGGAACAGCTTCACCCTGGATGCAGAAAAAGTGGTCAAGAAAGATTGACTACTATGTTAGTAGCAGGAGGTTTAGCTGGAGTAGCAAGTTGGGTTTCTTGCTACCCTTTTGATGTTATAAAGACAAGGCTACAAGGTCAAACACCAGCTACAATGAAATATAAAGGTATAGTTGATTGTCTAAGAAAGAGCATAAAAGATGAAGGGTATGGTGTGTTATGGAGAGGACTAGGAACTGCAGTTGCTAGGGCTTTTGTTGTCAATGGTGCAGTTTTTGCTGCATATGAGATCACATTGAGGGTGTTGTTTAGTAATGGGAGTATTCAAATGCAAGAAACAATTTAG 912 0.4101 MDFWPEFLASSWGKEFIAGGFGGIAGIVSGYPLDTLRIKQQSSKTGSAFSILRNMVSREGPASLYRGMAAPLASVTFQNAIVFQTYAILSRAFDKTVSPKDPPSYKGVALGGIGTGALQSILLSPVELVKIRLQLQNTNNLTAPQKGPINVAKSIWKQEGLRGIYRGLSITVLRDAPAHGFYFWTYEYMREQLHPGCRKSGQERLTTMLVAGGLAGVASWVSCYPFDVIKTRLQGQTPATMKYKGIVDCLRKSIKDEGYGVLWRGLGTAVARAFVVNGAVFAAYEITLRVLFSNGSIQMQETI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0232 303 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Aev09g0232 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Aev09g0232 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Aev09g0232 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Aev09g0232 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Aev09g0232 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 293 - -
Aev09g0232 303 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 293 - -
Aev09g0232 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Aev09g0232 303 SUPERFAMILY Mitochondrial carrier 11 285 IPR023395 -
Aev09g0232 303 Pfam Mitochondrial carrier protein 205 293 IPR018108 -
Aev09g0232 303 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Aev09g0232 303 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
Aev09g0232 303 Gene3D Mitochondrial carrier domain 13 300 IPR023395 -
Aev09g0232 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0232 Aev-Chr9 1883820 1886645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0232 1 294 Antiporters AT1G79900 73.898 7.77e-153 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0232 K15109 - gmx:100812056 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0232 09 1883820 1886645 Aev09g0232 09 1883820 1886645 ECH