Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0225 ATGGAGGTGTTCTTCCAAATCCCATTGTTCTCAAAGTTTGAAGATGGAACTCAATGGAGAGTGAATTGGAACAAAAATAATGATGGAAGGGTTTGGTTTGAGAAAAGGGGTTGGAAAGAGTTTGTTCAACACTACTCTCTAGCTCATGGTCACATGGTACTATTCAAGTATGATGTAGTTTCTTCTGAATTTGCATTGCAAATATTTGATACTACCACACTTGAAATTGACTATCCTCTCAACCGGTCAACCAATAGTCAACGAGCTAGAGATTCTACTGATCGCCAAAACCGGCCTATGGATGCGGATGTTGTGAAGATTGAAAAAGATGATACTGACGACGAAGATGAAGAAAATTATGATGACGACGAGTACGATTCTAGCCAACAAGAACTTCAAGAGGACATTATTGTACTAAGAGCCAGGATTCCAAAACCACCAAAGAAGAATCCTAGTTTCAAGGTTAAGTTGGGGCAATCATATGTGAAAGCAAGGTGCATTGCCATACCACAGAAATTTGCAAGAAAATATATGAATGAAGGAGCAGGGAGATTGAGAGTGTTAGGTATGGCAAGAACTTGGAATGTGGAGTTCAAATTTTGGAAAGGTGCAAACTCTAATATGATGAAGTACAAACTCCAAAAAGGATGGCACAAATTCAGAAGAGACAACAATTTGCAAGTTGGTGATGTTTGTGTCTTTGAGCTTCTTGATTCCACCAACCAATTCACTTTCAATGTTCTAATTTCACGTTCTTAG 759 0.386 MEVFFQIPLFSKFEDGTQWRVNWNKNNDGRVWFEKRGWKEFVQHYSLAHGHMVLFKYDVVSSEFALQIFDTTTLEIDYPLNRSTNSQRARDSTDRQNRPMDADVVKIEKDDTDDEDEENYDDDEYDSSQQELQEDIIVLRARIPKPPKKNPSFKVKLGQSYVKARCIAIPQKFARKYMNEGAGRLRVLGMARTWNVEFKFWKGANSNMMKYKLQKGWHKFRRDNNLQVGDVCVFELLDSTNQFTFNVLISRS* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0225 252 SMART B3_2 153 249 IPR003340 GO:0003677
Aev09g0225 252 CDD B3_DNA 151 248 IPR003340 GO:0003677
Aev09g0225 252 Gene3D - 139 252 IPR015300 -
Aev09g0225 252 MobiDBLite consensus disorder prediction 108 129 - -
Aev09g0225 252 SUPERFAMILY DNA-binding pseudobarrel domain 148 251 IPR015300 -
Aev09g0225 252 SUPERFAMILY DNA-binding pseudobarrel domain 14 79 IPR015300 -
Aev09g0225 252 Pfam B3 DNA binding domain 154 251 IPR003340 GO:0003677
Aev09g0225 252 Pfam B3 DNA binding domain 14 71 IPR003340 GO:0003677
Aev09g0225 252 MobiDBLite consensus disorder prediction 88 107 - -
Aev09g0225 252 ProSiteProfiles B3 DNA-binding domain profile. 152 252 IPR003340 GO:0003677
Aev09g0225 252 PANTHER B3 DOMAIN-CONTAINING 12 251 - -
Aev09g0225 252 Gene3D - 7 73 IPR015300 -
Aev09g0225 252 ProSiteProfiles B3 DNA-binding domain profile. 1 72 IPR003340 GO:0003677
Aev09g0225 252 MobiDBLite consensus disorder prediction 84 129 - -
Aev09g0225 252 CDD B3_DNA 14 70 IPR003340 GO:0003677
Aev09g0225 252 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 12 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0225 Aev-Chr9 1838864 1840422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0225 15 251 B3 DNA Binding Superfamily AT3G18990 26.403 6.19e-18 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev09g0225 B3 2.8e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0225 - - ahf:112784208 175.637