Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0195 ATGGATGTTACCAACGCGGAACGGAATACTGATGCCCAAAGCGATCAATATCCTTTGCTGATGGACCAGCTGGAAACCGATAATGTTCGTCAGCACATAATTGATATTTCAAGGAATGGTGAAGCTTTACCCAGCTCATCACATAATGATCGACACCCAGAAATGGCTTTACCTCCTCCAGATGAAAATCAACATAATGGCAGAACAGACGCCCCTACTCATCAAACACCGTTTTATTCACCTAGATATAGTGCTAGAAATTCGGCAGCAAGAAGAGGTGATGGGTATGGTCATCGCAGAAGGCACCCACTGAATTCTGGACTATGGGTTTCTGTTGAGCTCTTTGTCACTGTTGGTCAGATCATAGCATCTATTGTTGTCTTGTCATCATCTAGAGATGAACACCCTCAAGCACCGTTATTTGCATGGATTGTGGGTTATGCATCTGGTTGTGTTGCTACTCTTCCTATTCTTTACTGGCGATATCGGAACTATAATCAAAGTGCTGAACAAGATACCTCTCTACAATCTCAAGGATCTCCTGGAAGCAACTCTTCAGAACCTTCTTCTTATAATTCCATATCCGTTAATCATGTTTCAGATGAAGAGACTAGGTATGCTACAGAATCACCCACAAGAAGTGCTAGAATTCCTGGAGCCTTTAGTTCTAGGTTTAATGGATTAATAGACCATTTCAAGATGGTCTTGGATTGCTTCTTTGCAGTCTGGTTTGTCGTTGGCAACGTGTGGATCTTTGGAGGTCATACATCTCCTTCTGATGCTCCGAAATTGTATAGGTTATGTATAGTGTTTCTTACTTTTAGCTGCATCGGATATGCCATGCCGTTTATACTTTGTGCAACAATTTGTTGCTGCCTGCCTTGCATAATTTCTATTTTTGGCATTCGTGAGGAATTTTCTGCAAACAGAGGAGCCTCAATAGAATCCATTAATGCTCTGCCGATCTACAAGTTTAGATCGAAGGAAAATGAAACTGCTGTTGTTGAGGGTGTCAATACAGCTGTTGATGAAGGTGGAATTCTTGCTCCTGGGACTGAAAAGGAACGGCTGATATCAGGAGAAGATGCTGTTTGTTGCATTTGCCTCGCGAAATATGTCGACGACGATGAGCTTCGGGAGTTACCGTGCTTTCATGTATTCCACGTGGAGTGTATCGACAAATGGTTAAAGATAAATGCATCGTGTCCTCTTTGTAAATATGAAGTTGGTACAAGTAGTGAAGTGCCACCATCATCCATGGATCCCGATCACCAATAG 1278 0.4233 MDVTNAERNTDAQSDQYPLLMDQLETDNVRQHIIDISRNGEALPSSSHNDRHPEMALPPPDENQHNGRTDAPTHQTPFYSPRYSARNSAARRGDGYGHRRRHPLNSGLWVSVELFVTVGQIIASIVVLSSSRDEHPQAPLFAWIVGYASGCVATLPILYWRYRNYNQSAEQDTSLQSQGSPGSNSSEPSSYNSISVNHVSDEETRYATESPTRSARIPGAFSSRFNGLIDHFKMVLDCFFAVWFVVGNVWIFGGHTSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISIFGIREEFSANRGASIESINALPIYKFRSKENETAVVEGVNTAVDEGGILAPGTEKERLISGEDAVCCICLAKYVDDDELRELPCFHVFHVECIDKWLKINASCPLCKYEVGTSSEVPPSSMDPDHQ* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0195 425 CDD RING-H2_RNF111_like 364 406 - -
Aev09g0195 425 Pfam Ring finger domain 365 406 IPR001841 -
Aev09g0195 425 PANTHER PROTEIN, PUTATIVE-RELATED 1 419 - -
Aev09g0195 425 SMART ring_2 365 405 IPR001841 -
Aev09g0195 425 MobiDBLite consensus disorder prediction 69 83 - -
Aev09g0195 425 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 349 413 IPR013083 -
Aev09g0195 425 ProSiteProfiles Zinc finger RING-type profile. 365 406 IPR001841 -
Aev09g0195 425 MobiDBLite consensus disorder prediction 171 193 - -
Aev09g0195 425 MobiDBLite consensus disorder prediction 40 102 - -
Aev09g0195 425 SUPERFAMILY RING/U-box 356 415 - -
Aev09g0195 425 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0195 Aev-Chr9 1636793 1639151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0195 1 413 C3H Transcription Factor Family AT1G80400 55.952 4.29e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0195 - - gmx:100819729 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0195 09 1636793 1639151 Aev09g0195 09 1636793 1639151 ECH