Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0194 ATGGCTAAAGAAGGTCTTGGACTTGAAATCACCGAGCTAAGGTTGGGATTACCCGGTGGGGAACCAACAATTGTGAACAAGAACGAGAAGAAGAGAATGTTCTCCGAGATCAACGGCGGCAACAACGACGTTGGTGAGGAGAACAGCTCTTCCGGGGGACACCGGAAGGCCGAGACGAAGACTCAAGTGGTGGGGTGGCCTCCGGTGTGCTCTTATAGGAAGAAGAATAGTGTGAATGAGGGTTCAAAAATGTATGTGAAGGTTAGCATGGATGGTGCTCCTTTCTTGAGGAAGATTGATTTGGGGATGCATAAGGGTTATTCTGAGCTAGCCTTTGCCTTGGAGAAGCTCTTTGGTTGCTATGGAATTATGGGGGAAGCGATGAAGGATACAGAGAATAGTGAACAAGTTCCCATTTATGAGGACAAAGATGGTGACTGGATGCTCGTTGGAGATGTCCCTTGGGAAATGTTTATTGAATCATGCAAGAGGCTGAGGATTATGAAGAGATCAGATGCAAAAGGATTTGGTTTTCAACCAAAAGGATCTTTAAAGGGTTTCATAGAAGGCGTGGCAAAGTGA 582 0.4605 MAKEGLGLEITELRLGLPGGEPTIVNKNEKKRMFSEINGGNNDVGEENSSSGGHRKAETKTQVVGWPPVCSYRKKNSVNEGSKMYVKVSMDGAPFLRKIDLGMHKGYSELAFALEKLFGCYGIMGEAMKDTENSEQVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFGFQPKGSLKGFIEGVAK* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0194 193 PANTHER AUXIN-RESPONSIVE PROTEIN IAA6 4 176 - -
Aev09g0194 193 SUPERFAMILY CAD & PB1 domains 76 169 - -
Aev09g0194 193 ProSiteProfiles PB1 domain profile. 83 172 IPR000270 GO:0005515
Aev09g0194 193 MobiDBLite consensus disorder prediction 36 60 - -
Aev09g0194 193 Pfam AUX/IAA family 30 176 IPR033389 -
Aev09g0194 193 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 176 IPR003311 GO:0005634|GO:0006355
Aev09g0194 193 Gene3D - 77 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0194 Aev-Chr9 1623159 1626815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0194 26 191 B3 DNA Binding Superfamily AT5G20730 27.778 3.14e-14 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev09g0194 AUX_IAA 5.1e-46 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0194 K14484 - gmx:100791342 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0194 09 1623159 1626815 Aev09g0194 09 1623159 1626815 ECH
Aev09g0194 09 1623159 1626815 Aev10g1542 10 18341316 18343925 PCT