Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0155 ATGAGAGAAAGGGTGTTCATTATACTTGTTCAACAAAGGCACAAAGAGAATCAGAGAATCAAACGCAGAGAAATCAGAAATCAGAAAACAGAAAAACAGAATAAGATGTTAATGGCAGTGTTATTCGCCAATGCTGAAGGCAATATCCTCATCGAACGTTTTCATGGAGTTCCTGCAGAGGAGAGGCTACATTGGCGATCTTTCTTGGTTAAACTAGGAGCTGATAATCTTAAGGGTGCCAAAAATGAAGAGCTCCTAGTTGCTTGCAACAAGTCAGTTTATACTGTATACACAGTGTTTGGAGATGTGAGCATCTATGTTGTGGGCAAGGATGAGTATGATGAACTTGCTTTAACAGAAGTGATATATGTGATAACCACAGCAGTGAAGGATGTATGTGGGAAGAAGCCCCCAAGTGAGCGCCTTTTTCTTGACAAGTATGGAAAAATCTGTCTCTGTTTGGATGAAATTGTATGGCAGGATAGGATGGGAGAGTTGAAGGACACCGAGGCTTACGAGGAGGAGCTCATCGATTACGAAGAAGAAGATGAGAAAGCCCCCGATTCTGCTAAACCCGCTGCTGAATCCGGCAAGAAGGGATATGTTGGCATCCATAGTTCGGGATTTCGAGACTTCCTGTTGAAACCTGAGCTTCTTCGAGCTATTGTGGATTCAGGGTTCGAGCATCCATCAGAAGTGCAACACGAGTGCATCCCTCAAGCCATCTTAGGAATGGACGTCATTTGCCAAGCAAAATCTGGGATGGGAAAGACTGCTGTTTTTGTTCTTTCAACCCTTCAGCAAATCGATCCTGTTCCTGGTCAAGTAGCAGCTCTTGTTCTCTGCCACACAAGAGAACTAGCTTATCAGATTTGCCATGAATTTGAGAGGTTCAGCACATATCTTCCTGATATCAAAGTTGCTGTTTTCTACGGTGGTGTCAACATCAAGGTTCACAAAGATTTGCTCAAGAATGAATGCCCCCATATTGTTGTTGGAACACCTGGGAGGATTCTTGCTCTGACTAGAGATAAGGACCTAAGTTTAAAGAATGTGCGGCACTTTATACTTGATGAGTGTGACAAGATGCTTGAATCACTTGACATGAGAAGAGATGTGCAAGAGATTTTCAAGTTGACTCCTCATGATAAGCAAGTCATGATGTTTTCAGCTACCCTCAGCAAAGAGATCCGACCTGTTTGCAAGAAATTTATGCAAGATCCCATGGAAATTTACGTAGATGATGAGGCTAAATTGACTCTTCATGGTCTTGTCCAGCACTACATCAAATTGACCGAGTCAGAGAAGAACCGTAAGTTGAATGATCTTCTTGATGCTCTGGACTTCAACCAAGTTGTTATTTTTGTCAAGAGTGTTAGCAGAGCAGCAGAGTTGAACAAATTGCTAGTTGAGTGCAACTTTCCATCAATCTGCATACATTCTGGAATGTCTCAGGAAGAAAGATTGAAACGGTACAAAGGCTTCAAAGAAGGGAGGCAAAGGATTCTTGTGGCAACAGATTTAGTAGGAAGGGGTATTGACATAGAACGAGTTAATATAGTTATCAACTATGATATGCCTGATTCTGCAGATACTTACCTGCACAGGGTGGGAAGAGCTGGTAGATTTGGAACCAAGGGCCTTGCAATTACTTTTGTGTCTTCTACTGCTGACTCTGAAGTTCTCAATCAGGTGCAATCAAGGTTTGAGGTTGACATAAAGGAGCTTCCAGAACAAATTGACACTTCCACTTATATGCCAAACTGA 1767 0.4222 MRERVFIILVQQRHKENQRIKRREIRNQKTEKQNKMLMAVLFANAEGNILIERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELLVACNKSVYTVYTVFGDVSIYVVGKDEYDELALTEVIYVITTAVKDVCGKKPPSERLFLDKYGKICLCLDEIVWQDRMGELKDTEAYEEELIDYEEEDEKAPDSAKPAAESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTESEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGRQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSTADSEVLNQVQSRFEVDIKELPEQIDTSTYMPN* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0155 588 Pfam DEAD/DEAH box helicase 232 397 IPR011545 GO:0003676|GO:0005524
Aev09g0155 588 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 439 584 IPR001650 -
Aev09g0155 588 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 276 558 IPR027417 -
Aev09g0155 588 Gene3D - 203 419 IPR027417 -
Aev09g0155 588 CDD DEADc_DDX39 206 413 - -
Aev09g0155 588 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE-LIKE PROTEIN 188 583 - -
Aev09g0155 588 CDD SF2_C_DEAD 424 553 - -
Aev09g0155 588 Gene3D - 420 588 IPR027417 -
Aev09g0155 588 SUPERFAMILY SNARE-like 36 159 IPR011012 -
Aev09g0155 588 Coils Coil 15 35 - -
Aev09g0155 588 SMART ultradead3 226 427 IPR014001 -
Aev09g0155 588 Pfam Helicase conserved C-terminal domain 437 544 IPR001650 -
Aev09g0155 588 Gene3D - 29 173 - -
Aev09g0155 588 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 238 411 IPR014001 -
Aev09g0155 588 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 188 583 - -
Aev09g0155 588 SMART helicmild6 463 544 IPR001650 -
Aev09g0155 588 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 207 235 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0155 Aev-Chr9 1364002 1372699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0155 163 588 Eukaryotic Initiation Factors Gene Family AT5G11200 83.547 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0155 K12812 - gmx:100799082 818.92