Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0111 ATGGAGGACTCATGGGAATATTGGCTCTCTCATTTGGGAATGAGTGACCATGATGGTGCCACCACTACTACCACCAGTGCTGGGAGTAGTTTATCCTTTGAAGAGATCATAAGCTTCAAGGGTCATCAATTTTGTTATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGTTGATGATGAGGGGAAAAAAGAGGAGAAAAAAATATTGAAAAGGAGGGGTGTGGAGAATAACAAGAATGATGAGTTGGAGGGAAATAATAAAAATAATAATGATAATAATAATAATGATGAGGAGAAGAGTAGAGGAGGAACAAAGAAGGGAAGAAGCTCTTCAGAGGCAATGGAACACATAATGTCAGAGAGAAAGAGGAGGCAGCAAATGGCAGAGAGGTTCATTGCACTTTCAGCTACTATTCCTGGCTTGAAGAAGATCGACAAGGCCTCTGTACTTCAAGAAGCAATAAATTACGTGAAACAACTTCAAGAACGCATAGCAGAGCTAGAACAAGAAGAGACCAACAACAAGAAGAAGAAGAACAAGAAAAGCACAAAATCATTCATTAGTGTAACAAAATCACAGAGTTGTGAAGAAGATGATGATGAAGAAGAAGAAGAAGAAGTAGTGGTCCCAGAAGTGGAAGCAAGAGAGTTAGAGAAAGAAGTACTAATCAGAATCCATTGTGAGAAACGAAATGGAATAATGATCAATTTATTGGCTCTGTTAGAAAATAATCATCTCTCTGTAGCAAGTAGCAGCATTTTGCCATTTGGAAACTCTGCTCTCAACATTATCATCATTGCTCAGAAGACCGAGGAATTCAACTTAGCAGTGAACGATTTGGTGAAGAACTTAAAGAAGTATCTTTTGAAGTTTATGAGATGCAGCAATATCAATTGTGGTCCATGCTAG 927 0.3635 MEDSWEYWLSHLGMSDHDGATTTTTSAGSSLSFEEIISFKGHQFCYNNNNNNNNNNNNNNNNVDDEGKKEEKKILKRRGVENNKNDELEGNNKNNNDNNNNDEEKSRGGTKKGRSSSEAMEHIMSERKRRQQMAERFIALSATIPGLKKIDKASVLQEAINYVKQLQERIAELEQEETNNKKKKNKKSTKSFISVTKSQSCEEDDDEEEEEEVVVPEVEARELEKEVLIRIHCEKRNGIMINLLALLENNHLSVASSSILPFGNSALNIIIIAQKTEEFNLAVNDLVKNLKKYLLKFMRCSNINCGPC* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0111 308 Coils Coil 85 105 - -
Aev09g0111 308 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 58 298 - -
Aev09g0111 308 MobiDBLite consensus disorder prediction 98 130 - -
Aev09g0111 308 SMART finulus 123 172 IPR011598 GO:0046983
Aev09g0111 308 MobiDBLite consensus disorder prediction 63 91 - -
Aev09g0111 308 MobiDBLite consensus disorder prediction 48 62 - -
Aev09g0111 308 Pfam Helix-loop-helix DNA-binding domain 121 167 IPR011598 GO:0046983
Aev09g0111 308 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 117 166 IPR011598 GO:0046983
Aev09g0111 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 120 178 IPR036638 GO:0046983
Aev09g0111 308 Coils Coil 156 186 - -
Aev09g0111 308 PANTHER BHLH TRANSCRIPTION FACTOR 58 298 - -
Aev09g0111 308 Gene3D - 108 197 IPR036638 GO:0046983
Aev09g0111 308 MobiDBLite consensus disorder prediction 48 130 - -
Aev09g0111 308 MobiDBLite consensus disorder prediction 176 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0111 Aev-Chr9 944551 948332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0111 103 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.130 3.59e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g0111 HLH 3.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0111 - - ahf:112712745 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1465 10 17863329 17867293 Aev09g0111 09 944551 948332 PCT
Aev09g0111 09 944551 948332 Aev10g1464 10 17848355 17850321 PCT