Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0110 ATGGAGGATTCATGGGAGAATTTGCATCTTCAAATGGAAATGGATGATATCCTAGAAATGTGCAACCCTTCTTATAATGAAGATGATGATGAGTTATTCCTAAGAGAGATACTTTTGCAACCATCTTTCTCTTCAGAAAGTGATGAGAGTGATCTTAATAATCAATACCATTATGACCACTCCTTCCATACTACCACCAATTCCTACTCCACACTCCAAAACAACAATATCATATCCACTGTTGGATCAGATGTGTCCGTTCTTGATCAAATGGTCAAGAGTGATAGTTCAAACTCCTTAGTGTCTAAACAAAATGGTTCCAAAATCAATAACAATAAAAAAAGGCCTCATCATAGATCTTCTTCCTCTTCTTCTTCTCCAAGGACATACATTTTGTCCTTTGATAACTCAACAATGACCTCTGCTACCCCTGAACCTGAACCTTATCCCAAAAATCATGACAAATTGGCAAAGGGTAGTAAGGGAATTTCACATTCTCCTTCTAATTTGCCTGCAAAAAGGACCACCGTGGCTGAACCAAGAGTGAGGGATGATAGTGCAAATAATAACAATCAAGGGGCAAATAAGAAAGCAAGAACTTCTTCTCAAACTATGGATCACATAATGGCAGAGAGAAAAAGGAGGCAAGAACTCACTGAAAGGTTCATAGCACTTTCAGCAACTATTCCTGGATTGAGCAAGACGGATAAGGCGTCGATACTTCGAGCAGCTATAGATTATGTGAAACAACTTCAAGAACGTGTAAAAGAGCTAGAAAAACAAGAAAATTTGAAGAGGAGTGTGAAATCAGTGATATTGGTAAGGAATAATAAAAAATCAGATTTGTTATGTGAAGAAAATCATCAGCATGAAGACATAACAACCACAACCACCACAACATCAAGTGTAACGACAAGAAGCTCTGAAGAAAATTATTATTGTTGTGGCAGCTTATTACCTGAGATTGAAGCAAGAGTTATGGGGAAAGAGGTGCTAATTGAGATTCATTGTGAAAAAGGGAATGGAATTGAGCTCAAGATTTTTGACAAACTTGAGAATCTTCATCTTTGTGTCACTGGTAGTAGTGTTCTACCTTTTGGGAATTCTGCTCTTGGGATTACTATCATAGCTCAGATGAGTGAGTCGTACAATATGGAGGTGGATGATGTAGTGAAAAACCTAAGGGAAGTGGTGTTGATGAAGAAAAAGTCAGTCACACATCATGGAAGCTCTCGCAACAGTAGTGATCCGTACTAG 1257 0.3811 MEDSWENLHLQMEMDDILEMCNPSYNEDDDELFLREILLQPSFSSESDESDLNNQYHYDHSFHTTTNSYSTLQNNNIISTVGSDVSVLDQMVKSDSSNSLVSKQNGSKINNNKKRPHHRSSSSSSSPRTYILSFDNSTMTSATPEPEPYPKNHDKLAKGSKGISHSPSNLPAKRTTVAEPRVRDDSANNNNQGANKKARTSSQTMDHIMAERKRRQELTERFIALSATIPGLSKTDKASILRAAIDYVKQLQERVKELEKQENLKRSVKSVILVRNNKKSDLLCEENHQHEDITTTTTTTSSVTTRSSEENYYCCGSLLPEIEARVMGKEVLIEIHCEKGNGIELKIFDKLENLHLCVTGSSVLPFGNSALGITIIAQMSESYNMEVDDVVKNLREVVLMKKKSVTHHGSSRNSSDPY* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0110 418 MobiDBLite consensus disorder prediction 182 205 - -
Aev09g0110 418 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 202 264 IPR036638 GO:0046983
Aev09g0110 418 MobiDBLite consensus disorder prediction 95 109 - -
Aev09g0110 418 Pfam Helix-loop-helix DNA-binding domain 206 252 IPR011598 GO:0046983
Aev09g0110 418 SMART finulus 208 257 IPR011598 GO:0046983
Aev09g0110 418 Coils Coil 241 268 - -
Aev09g0110 418 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 251 IPR011598 GO:0046983
Aev09g0110 418 PANTHER BHLH TRANSCRIPTION FACTOR 1 402 - -
Aev09g0110 418 Gene3D - 200 275 IPR036638 GO:0046983
Aev09g0110 418 MobiDBLite consensus disorder prediction 95 206 - -
Aev09g0110 418 MobiDBLite consensus disorder prediction 122 145 - -
Aev09g0110 418 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0110 Aev-Chr9 933810 938410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0110 115 398 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.488 2.46e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g0110 HLH 2.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0110 - - ahf:112779544 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1464 10 17848355 17850321 Aev09g0110 09 933810 938410 PCT