Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0082 ATGGATTGTTCTTCATATATTAACACTTCCTTGGATCTCAATATTAATCCTTATCACAGAGTTCATGAGGAAGTTCAAAAAAAGGAGGTGGAAAGCAATTTTTTCTCATTGGGTATGACAAAGTTTCCTCTTAAAGAAGAGTCAACTAGTGAGTTGGAAGAGGAATTGAAGCGTGTGACTGCAGAGAACAAGAGATTGGTAGAGATGCTATCAGTGGTTTGTGAGAATTATAACAATTTGAGGAGCCATTTGAAGGATTATATGACCAAAGTTACTACTGAGAAGGATCTTAGCCTTTCATCATCAAGGAAAAGGAAATCTGAGAGCAGCAACAATAACAACAACAATTGTGATCAAATGGAATTTGCAATCAATAACAATGGTAACTCAGAGAGCAGCTCGACCGACGAAGAATCGTGCAAGAAGCCGAGGGAGGAAACAATCAAGGCGAAAGTTTCCAGAGTTTATGTCAGGACTGAAGCTTCTGATACAAGCCTTATTGTGAAAGATGGATACCAATGGAGGAAATATGGGCAAAAAGTGACAAGAGATAACCCTTCTCCAAGGGCATATTTCAAGTGCTCTTTTGCTCCAAGTTGTCCTGTGAAAAAGAAGGTGCAAAGAAGTATTGATGATCAATCTGTGCTGGTTGCAACTTATGAAGGGGAGCACAATCATCCACACCCTTCTCAGATGGAGTCAACATCCGGCTCTAACCGTAGCATGACCTTAGGATCAGTACCTTGCTCGGCGTCGCTGAGCTCCTCCGCGCCAACCGTTACCCTTGACTTGACGAAAACCAAGCTCAACAACGACTCCAAGAACACGAAACACAAGGTCGATTCACCCGAAGTTCCTCAGATTTTGGTGGAACAGATGGCTAATTCCTTGACTAAGGATCCTAATTTCAGAGCAGCACTTGTTGCTGCTCTCTCAGGAAGAGTGTTGCACAAGAATTGA 960 0.4219 MDCSSYINTSLDLNINPYHRVHEEVQKKEVESNFFSLGMTKFPLKEESTSELEEELKRVTAENKRLVEMLSVVCENYNNLRSHLKDYMTKVTTEKDLSLSSSRKRKSESSNNNNNNCDQMEFAINNNGNSESSSTDEESCKKPREETIKAKVSRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSIDDQSVLVATYEGEHNHPHPSQMESTSGSNRSMTLGSVPCSASLSSSAPTVTLDLTKTKLNNDSKNTKHKVDSPEVPQILVEQMANSLTKDPNFRAALVAALSGRVLHKN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0082 319 Coils Coil 49 69 - -
Aev09g0082 319 MobiDBLite consensus disorder prediction 93 145 - -
Aev09g0082 319 Gene3D WRKY domain 151 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev09g0082 319 PANTHER TRANSCRIPTION FACTOR 1 319 - -
Aev09g0082 319 MobiDBLite consensus disorder prediction 104 134 - -
Aev09g0082 319 SUPERFAMILY WRKY DNA-binding domain 165 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev09g0082 319 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 319 IPR044810 GO:0003700
Aev09g0082 319 MobiDBLite consensus disorder prediction 222 249 - -
Aev09g0082 319 MobiDBLite consensus disorder prediction 229 249 - -
Aev09g0082 319 ProSiteProfiles WRKY domain profile. 163 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev09g0082 319 Pfam WRKY DNA -binding domain 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev09g0082 319 SMART WRKY_cls 168 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0082 Aev-Chr9 662536 664160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0082 4 319 WRKY Transcription Factor Family AT1G80840 52.454 6.80e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev09g0082 WRKY 2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0082 - - gmx:100170678 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0082 09 662536 664160 Aev09g0082 09 662536 664160 ECH