LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev09g0050	ATGGCGAAGATGTCGCAGAATAAGAAAATAAGCCTCATCAAGAACAATACTAGTTCCCCTGAACCCACAAAAAAATGCACTAAAAATATTATTAGTAGTAATAGTAATAGTGATAGTAATAGTAGTGTCTCACCTTCATCATCATCCACCAAGAAACAGAGGAAACGTAAAAGCATACCAAGAGATTCACCTCCTCAACGAAGCTCTATCTTCAGGGGAGTCACAAGGCACCGATGGACTGGTCGATTTGAGGCTCATTTGTGGGATAAAGATTGCTGGAATGAATCACAGACCAAGAAAGGGAGACAAGTGTATCTAGGAGCATATGATGATGAAGAAGCCGCTGCACGTGCCTATGACTTGGCAGCATTGAAGTATTGGGGCCAACACACCATCCTCAATTTCCCTATATCGAATTATCAAGATGAGCTCAAGGATATGGAGGGTCAGTCCAAAGAAGAATACATTGGATCCTTAAGAAGAAAAAGCAGTGGATTCTCTAGAGGAGTCTCAAAATACAGGGGAGTAGCAAGACACCACCACAATGGAAGATGGGAAGCTAGAATTGGCAGAGTCTTCGGCAACAAATATCTATATCTTGGAACCTATGCTACACAAGAAGAAGCAGCCATGGCATATGACATGGCAGCCATAGAGCATCGCGGGCTTAATGCCGTTACAAATTTTGACCTCAGTCGTTACATTGATTTGTTACAACCTAAAATACAAGAAGATAACAAAGAAAGCCCTAATAACAACAATGAAAAACTAAACCCTAGTTCTAATAAACTTGAAGTAGGGTTTAATATTTCCCATCAACATCATCATGATCCAACTACTAAAGAGATTGAGCCTGAAAATAATTTGATGCAGTCGTCATCGTCATCAGATGGTGAAACCTCAAAATCTTCGGCACTTGGACTTCTCTTGCAATCATCAAAATTCAAAGAAATGTTTGAAAGGACTACTTCATCGGTTAATAATGAAGAAGAACCTTTGGAATCATCAAAACCTACTCGTCGCACATTTCCTGAAGATATTCAGACATTTTTTGAAGATCACGATTCATCATCTTCATACACTAATTATGAGAATGATGATATTATATTTGGTGACTTGTGTTCTTTGCCGGCATCAATTTTTCATTTTGAGCTTGATTCTTGA	1164	0.3892	MAKMSQNKKISLIKNNTSSPEPTKKCTKNIISSNSNSDSNSSVSPSSSSTKKQRKRKSIPRDSPPQRSSIFRGVTRHRWTGRFEAHLWDKDCWNESQTKKGRQVYLGAYDDEEAAARAYDLAALKYWGQHTILNFPISNYQDELKDMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAMAYDMAAIEHRGLNAVTNFDLSRYIDLLQPKIQEDNKESPNNNNEKLNPSSNKLEVGFNISHQHHHDPTTKEIEPENNLMQSSSSSDGETSKSSALGLLLQSSKFKEMFERTTSSVNNEEEPLESSKPTRRTFPEDIQTFFEDHDSSSSYTNYENDDIIFGDLCSLPASIFHFELDS*	388

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev09g0050	387	PANTHER	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	33	368	-	-
Aev09g0050	387	MobiDBLite	consensus disorder prediction	320	340	-	-
Aev09g0050	387	CDD	AP2	171	232	IPR001471	GO:0003700\|GO:0006355
Aev09g0050	387	ProSiteProfiles	AP2/ERF domain profile.	70	136	IPR001471	GO:0003700\|GO:0006355
Aev09g0050	387	SUPERFAMILY	DNA-binding domain	69	138	IPR016177	GO:0003677
Aev09g0050	387	MobiDBLite	consensus disorder prediction	273	303	-	-
Aev09g0050	387	ProSiteProfiles	AP2/ERF domain profile.	172	230	IPR001471	GO:0003700\|GO:0006355
Aev09g0050	387	SUPERFAMILY	DNA-binding domain	171	232	IPR016177	GO:0003677
Aev09g0050	387	MobiDBLite	consensus disorder prediction	243	262	-	-
Aev09g0050	387	MobiDBLite	consensus disorder prediction	284	303	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev09g0050	Aev-Chr9	435532	441067	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev09g0050	66	234	AP2-EREBP Transcription Factor Family	AT5G57390	72.781	5.23e-90	276

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2 or ERF-AP2	Aev09g0050		AP2	7.3e-13	CL0081

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev09g0050	K09285		-	zju:107429620	432.18

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