Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0041 ATGGATGGTATTCATGGGGATGATTCGCGGATGCACATGGGTGATGAACAGCATCCTATGCATGTGCCGTATGTGCAAGAACATGAGCATCATGGATTGCACCATATGAGTAATGGGAATGGGATGGATGATGATCAGAATAATGGCAGTGACAATAACTGTGGTGGGAGTGAGAGTTTGGATGGTGAAGTCCCCTCCAACCATGGAAACCTAAATGAGAATCACACTGCAATGATAGATCAAGGGGGTGATGTTGGGGATCAGCTTACATTGTCTTTTCAGGGCCAAGTTTATGTCTTTGACTCCGTGTCACCGGAAAAGGTTCAGGCTGTACTACTACTATTAGGAGGCCGTGAAATACCTCCAACTATGCCTGCCATCCCAATATCTCCTCACCAAAATAATCGGGGATTTACTGATACTCCACAAAAATTCAGTGTCCCCCAGAGATTAGCCTCGTTGCTGAGATTTCGTGAAAAGCGGAAAGAACGAAATTTCGACAAAAAGATTCGTTATACTGTTCGTAAAGAAGTAGCATTAAGGATGCAAAGAAATAAAGGTCAGTTTACGTCTTCTAAGCCCAATCATGACGAATCTGCATCGGGTGCAGCAAACTGGGGGACAAATGAAGGCTGGACGTCAGACAATAATGGATCCCAACAGCAAGATATTGTTTGTCGCCACTGTGGCATAAGTGAGAAGTGCACACCGATGATGCGACGTGGACCTGAAGGGCCAAGAACCCTATGCAATGCTTGTGGACTAATGTGGGCAAATAAGGGAACTCTTAGGGACCTATCAAGGGCAGCATCCATGCCTGCACATAATGCTTCATTAAACAAGAATGAGAACAAAAATTTCGAGGCCAACCAAATAGTCCAAAGTGTGGCAGGAGGAGATGTTGATGATTCATCATGA 918 0.4477 MDGIHGDDSRMHMGDEQHPMHVPYVQEHEHHGLHHMSNGNGMDDDQNNGSDNNCGGSESLDGEVPSNHGNLNENHTAMIDQGGDVGDQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREIPPTMPAIPISPHQNNRGFTDTPQKFSVPQRLASLLRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKPNHDESASGAANWGTNEGWTSDNNGSQQQDIVCRHCGISEKCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSRAASMPAHNASLNKNENKNFEANQIVQSVAGGDVDDSS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0041 305 Pfam tify domain 88 116 IPR010399 -
Aev09g0041 305 CDD ZnF_GATA 225 267 IPR000679 GO:0006355|GO:0043565
Aev09g0041 305 ProSiteProfiles Tify domain profile. 82 117 IPR010399 -
Aev09g0041 305 PANTHER GATA TRANSCRIPTION FACTOR 28 4 290 - -
Aev09g0041 305 Pfam GATA zinc finger 226 262 IPR000679 GO:0006355|GO:0043565
Aev09g0041 305 MobiDBLite consensus disorder prediction 186 219 - -
Aev09g0041 305 SMART tify_2 82 117 IPR010399 -
Aev09g0041 305 MobiDBLite consensus disorder prediction 40 77 - -
Aev09g0041 305 Pfam CCT motif 150 192 IPR010402 GO:0005515
Aev09g0041 305 ProSitePatterns GATA-type zinc finger domain. 226 253 IPR000679 GO:0006355|GO:0043565
Aev09g0041 305 PANTHER GATA TRANSCRIPTION FACTOR 28 4 290 IPR045280 GO:0006355
Aev09g0041 305 ProSiteProfiles GATA-type zinc finger domain profile. 220 276 IPR000679 GO:0006355|GO:0043565
Aev09g0041 305 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 221 284 - -
Aev09g0041 305 SMART GATA_3 220 273 IPR000679 GO:0006355|GO:0043565
Aev09g0041 305 Gene3D - 216 284 IPR013088 GO:0006355|GO:0008270
Aev09g0041 305 ProSiteProfiles CCT domain profile. 150 192 IPR010402 GO:0005515
Aev09g0041 305 MobiDBLite consensus disorder prediction 30 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0041 Aev-Chr9 386064 388715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0041 1 304 Tify Gene Family AT1G51600 61.564 1.04e-136 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev09g0041 CCT 3.9e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0041 - - gmx:100812262 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0041 09 386064 388715 Aev09g0041 09 386064 388715 ECH