Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2677 ATGGGTGGTTCTTCACCTTGTGCTTCCTGCAAATTGTTGAGGCGTCGTTGCACCAAAGAGTGTATTTTTGCTCCTTATTTTCCTTCTGATGACCCTCGCAAGTTTGCCATTGTTCACAAGGTCTTTGGTGCTAGCAATATCAGTAAAATGTTGCAGGAGCTTCCAATTCATCAAAGAGCAGATGCAGTAAGCAGTTTAGTATATGAGGCAAATGCAAGAGTAAGAGACCCTGTTTATGGATGTGTTGGAGCCATTTCATTTCTTCAAAACCAGGTTTCACAATTGCAAATGCAACTTGCAGTTGCTCAGGCAGAGATCCTCTGCATCCAGATGCAGCAAGAGCCTAATAATAATAATTCCTTATTACCAACTACTCATCAACTAGATCAAGTAGATGATGACAAATTTAATATGCTCCTATCTCACAACAATAACAATGATAACTATGAAATCCTTCCTCAATATATTAGCTTTGCATCTTCTTCTTCCTCATCTTCCAGTGTATTCCAAGATTCTCATCATCAGCCTCTTAAGAGAGAGCCTTTTTGTTGA 552 0.3931 MGGSSPCASCKLLRRRCTKECIFAPYFPSDDPRKFAIVHKVFGASNISKMLQELPIHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAQAEILCIQMQQEPNNNNSLLPTTHQLDQVDDDKFNMLLSHNNNNDNYEILPQYISFASSSSSSSSVFQDSHHQPLKREPFC* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2677 183 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Aev08g2677 183 Coils Coil 85 105 - -
Aev08g2677 183 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 2 181 - -
Aev08g2677 183 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Aev08g2677 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2677 Aev-Chr8 25308825 25310945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2677 3 140 AS2 family AT2G30130 79.710 5.72e-77 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev08g2677 LOB 2.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2677 - - aip:107644491 266.929