Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2647 ATGGCACGGCCGGGGGCAGGGCAATCAGATGCCACCACTCACCATGTCATTGACATAGCTGGGAGCTCTGAAGATGCTTCCACTTCCACCAATGTGCGTTCTAGTGGTGGAAATGCACCTAGTGTTGCGGCCAGGGTTCCTGTTTCTAGGTCTGCTAGGCTGTCTGGTGGACCGAATACTAGGAGTTCTTCATTAATGAGACGAGGGGATGGTCGCAGGCAAAGGAGTCCTTTGGATTCTGGGTTGTGGGTATCTATTGAACTACTCATCACGGTTGCTCAGATTGTTGCATCGGTTGTTGTTTTGTGTTTGTCAAGGGATGAGCGTCCAGACACGCCCTTGTATGCATGGATTGTTGGATATGCAACTGGATGTGCTGTTTCCATTCCTCTACTTTTCTGGAGATATCAGCATAGTCGCTATGCTCGAGAGCAGGATTTAGCCCAGTCGCGTCGAAATTCCCCTCAGATTAATGATCCTTCTGGTGGAGCAGAAGATGCTGTTGGATCCTCCAGAAGCAATCTATCTTCGATTATGATGAATGCAAGACTAAAGGCACTCATGAACTACTTCAAAATTTCCACGGATTTCTTTTTCGCTGTATGGTTTGTCATTGGAGTTGTTTGGATTTTTGGAGGACATTCATCTGCTAAAGACGCTCCTCATTTGTACAGGTTATGTGTAGTCTTTCTTAGTATTAGCTTTATCGGTTACTCCACGCCCTTCATTCTGTGTGCAACAATCTGCTGTTGTCTGCCTTGTATAATTACTTTCGTTGGGGTTAGAGAGGATCAGACACAAACCCGAGGCGCAACCTCTGAATCAATTGATGCTCTGCCAACTTACAAGTTCAAGATGAAGAAAAATAAATATAGGGGTGAAAGTAACTCAGCTGCCGATGAAGGTGGAGTCGTGGCCGCAGGAACTGACAAGGAACGAATGATATGCGGAGAAGACGCAGTTTGCTGCATCTGCCTGGCTGATTATGAAAACAATGATGAGCTAAGAGAATTGCCATGTTGTCATCTTTTCCACAAAGAATGCGTGGACAAGTGGTTGAAGTTAAATGCATTATGCCCTCTCTGCAAGAGTGAGGTTGGTGAAACAAGATCAGTATCTGTGGAAAATGCAAACCAATAG 1140 0.4553 MARPGAGQSDATTHHVIDIAGSSEDASTSTNVRSSGGNAPSVAARVPVSRSARLSGGPNTRSSSLMRRGDGRRQRSPLDSGLWVSIELLITVAQIVASVVVLCLSRDERPDTPLYAWIVGYATGCAVSIPLLFWRYQHSRYAREQDLAQSRRNSPQINDPSGGAEDAVGSSRSNLSSIMMNARLKALMNYFKISTDFFFAVWFVIGVVWIFGGHSSAKDAPHLYRLCVVFLSISFIGYSTPFILCATICCCLPCIITFVGVREDQTQTRGATSESIDALPTYKFKMKKNKYRGESNSAADEGGVVAAGTDKERMICGEDAVCCICLADYENNDELRELPCCHLFHKECVDKWLKLNALCPLCKSEVGETRSVSVENANQ* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2647 379 SUPERFAMILY RING/U-box 315 369 - -
Aev08g2647 379 MobiDBLite consensus disorder prediction 22 38 - -
Aev08g2647 379 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 9 378 - -
Aev08g2647 379 SMART ring_2 322 362 IPR001841 -
Aev08g2647 379 MobiDBLite consensus disorder prediction 148 169 - -
Aev08g2647 379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 368 IPR013083 -
Aev08g2647 379 ProSiteProfiles Zinc finger RING-type profile. 322 363 IPR001841 -
Aev08g2647 379 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 378 - -
Aev08g2647 379 CDD RING-H2_RNF111_like 321 363 - -
Aev08g2647 379 Pfam Ring finger domain 322 363 IPR001841 -
Aev08g2647 379 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2647 Aev-Chr8 24883377 24885279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2647 58 373 C3H Transcription Factor Family AT1G80400 51.807 9.88e-124 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2647 - - gmx:100785559 496.893