Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev08g2641 | ATGTCTCAGACTAACTGGGAAGCTGATAAGATGTTGGATGTTTACATCCATGATTACCTGGTGAAGAGGGATTTGAAGGCTTCTGCTCAGGCTTTTCAAGCTGAGGGGAAAGTATCATCTGACCCTGTTGCTATTGATGCCCCAGGAGGTTTTCTGTTCGAGTGGTGGTCGGTTTTCTGGGACATATTTATTGCCAGGACTAATGAGAAACACTCAGAGGTTGCAGCTTCATATATTGAGACACAGATGATTAAGGCAAGGGAGCAACAGCAGCAGCAACAACAGCCACAACCCCAGCAGTCACAGCATCAACAGCAGCAGCAGCACATGCAGATGCAACAGCTCCTATTGCAGAGGCAAGCACAACAGCAACAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAACAACAGCAGCCACCACAGCCACAACCGCAGCAGCAGCCACCACCACAACAACAGCAAAGTAGGGATAGGGCTCATCTCTTAAATGGCAATACAAATGGGTTGGTTGGGAACCCTGGAACGGCAAATGCAATGGCAACAAAGATGTATGAGGAAAGGTTAAAGAGAGAATCTTTGGATGAAACAGCAATGAAGCAAAGATTTGGTGACAACATGGGTCAGCTCCTGGACCCAAATCACGCCTCAATACTGAAGTCAGCTGCGGCTTCTGGCCAGCCTTCAGGGCAAGTTTTACATGGCTCTGCCGGTGGGATGTCTCCACAAGTTCAAGCTCGTAGCCAGCAATTACCAGGGTCTACTCCGGACATAAAGAGTGAGATTAATCCCGTTTTAAATCCTAGAACTGCGGGTCCTGAAGCATCATTGATGGGAATTCCTGGATCAAATCAAGGTAGTAACAATCTGACTCTGAAGGGTTGGCCATTGACGGGTTTGGACCAACTGCGCTCTGGTCTACTCCAGCAACAGAAACCTTTCATGCAGGGTCCTCAGCCTTTTCATCAACTTCAGATGTTGACACCACAGCATCAACAACAGATCATGCTTGCACAACAAAATTTGGCATCTCCATCTGCTAGTGATGAGAGTAGAAGACTCAGAATGCTATTGAATAATAGGAGCATGAGCATGAATAAGGATGGTCTTTCAAATCCTGTTGGTGATGTAGTGCCAAATGTTGGATCACCTCTTCAAGGTGGTGCCCCCCCTTTTCCTCGTGGAGATACAGATATGCTAATGAAGTTGAAACTGGCTCAGTTACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAACAGTCAAACACCAATCCACAGCAGCAGCAACTTCAACAGCATTCACTTTCGAATCAGCAATCTCAGAATTCAAATCATAGCATGCATCAGCAAGATAAAGTAGGGGGAGGTGCTGGCAGTGTCACTGTGGATGGTGGCATGTCAAACTCCTTTAGAGGAAATGATCAGGTTTCAAAAAACCAGATTGGGAGAAAGAGAAAGCAACCTGTATCTTCTTCAGGACCTGCCAATAGCTCAGGAACTGCAAATACAACAGGCCCATCACCGAGTTCAGCACCCTCAACGCCCTCAACTCACACTCCGGGTGATGTGATGTCAATGCCTGCTATGCCTCATAGTGGTAGTTCTTCAAAGCCGCTAATGATGTTTGGCACTGATGGCACTGGAACTCTTACATCATCTTCAAACCAGCTGGCTGATGTGGATCGCTTTGTGGAGGATGGATCTCTTGATGAAAATGTCGAGTCTTTTTTATCCCATGATGATACAGACCCCAGAGATACTGTTGGTCGTTGTATGGATGTAAGCAAAGGCTTCACATTTTCTGATGTAAATTCTGTACGTGCTAGCACAAGCAAAGTTGTATGTTGTCATTTCTCATCTGATGGGAAATTGCTTGCAAGTGGTGGGCATGACAAAAAGGCTGTTTTATGGCACACGGATACCCTAAAGCAGAAGGCTACTCTTGAAGAACATTCATCTATGATCACTGATGTTCGTTTCAGTCCAAGCTTGTCTCGTCTGGCAACATCTTCGTTCGACAAAACTGTCAGGGTTTGGGATATTGACAATCCTGGGTATTCGCTTCGCACCTTTACAGGACATTCTGCATCTGTTAGGTCATTAGATTTTCACCCGAATAAAGATGACCTTATCTGCTCTTGTGATGGTGATGGTGAGATACGATATTGGAGCATAAATAATGGAAGTTGTGCTAGAGTCTCCAAGGGTGGCACCACTCAGATGAGATTCCAACCTCGTCTAGGAAGGTACCTTGCTGCAGCTGCCGAGAATATTGTGTCCATACTTGATGTTGAGACACTACAATGCCGATATTCATTAAAGGGACACACGAAGCAAATAAACTCGGTGTTTTGGGACCCTTCTGGGGAGTTGCTGGCATCTGTGAGTGAGGACTCTGTCAGGGTTTGGACTGTGGGAAGTGGGAGCGAAGGGGATTGTGTTCATGAGCTTAGCTGTAATGGCAGCAAGTTTCAATCATGTGTTTTCCACCCAACATACCCTTCATTGCTCGTCATTGGCTGTTACCAGTCGTTGGAGCTCTGGAACATGACGGAGAACAAGACGATGACACTTCCGGCTCATGAGGGACTTATCGCGGCCCTCGCGGTTTCGACCGTAAACGGTTATGTTGCTTCTGCCAGTCATGACAAGTTCATCAAGCTCTGGAAGTGA | 2691 | 0.4675 | MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQMIKAREQQQQQQQPQPQQSQHQQQQQHMQMQQLLLQRQAQQQQQQQQQQQQQQQQQQQQQQQQPPQPQPQQQPPPQQQQSRDRAHLLNGNTNGLVGNPGTANAMATKMYEERLKRESLDETAMKQRFGDNMGQLLDPNHASILKSAAASGQPSGQVLHGSAGGMSPQVQARSQQLPGSTPDIKSEINPVLNPRTAGPEASLMGIPGSNQGSNNLTLKGWPLTGLDQLRSGLLQQQKPFMQGPQPFHQLQMLTPQHQQQIMLAQQNLASPSASDESRRLRMLLNNRSMSMNKDGLSNPVGDVVPNVGSPLQGGAPPFPRGDTDMLMKLKLAQLQQQQQQQQQQQQSNTNPQQQQLQQHSLSNQQSQNSNHSMHQQDKVGGGAGSVTVDGGMSNSFRGNDQVSKNQIGRKRKQPVSSSGPANSSGTANTTGPSPSSAPSTPSTHTPGDVMSMPAMPHSGSSSKPLMMFGTDGTGTLTSSSNQLADVDRFVEDGSLDENVESFLSHDDTDPRDTVGRCMDVSKGFTFSDVNSVRASTSKVVCCHFSSDGKLLASGGHDKKAVLWHTDTLKQKATLEEHSSMITDVRFSPSLSRLATSSFDKTVRVWDIDNPGYSLRTFTGHSASVRSLDFHPNKDDLICSCDGDGEIRYWSINNGSCARVSKGGTTQMRFQPRLGRYLAAAAENIVSILDVETLQCRYSLKGHTKQINSVFWDPSGELLASVSEDSVRVWTVGSGSEGDCVHELSCNGSKFQSCVFHPTYPSLLVIGCYQSLELWNMTENKTMTLPAHEGLIAALAVSTVNGYVASASHDKFIKLWK* | 897 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev08g2641 | 896 | MobiDBLite | consensus disorder prediction | 468 | 527 | - | - | |
Aev08g2641 | 896 | CDD | WD40 | 612 | 896 | - | - | |
Aev08g2641 | 896 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 654 | 689 | - | - | |
Aev08g2641 | 896 | MobiDBLite | consensus disorder prediction | 87 | 112 | - | - | |
Aev08g2641 | 896 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 697 | 735 | - | - | |
Aev08g2641 | 896 | SMART | WD40_4 | 772 | 810 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | SMART | WD40_4 | 857 | 896 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | SMART | WD40_4 | 647 | 686 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | SMART | WD40_4 | 605 | 644 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | SMART | WD40_4 | 690 | 730 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | SMART | WD40_4 | 816 | 855 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 864 | 896 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | Coils | Coil | 112 | 145 | - | - | |
Aev08g2641 | 896 | SUPERFAMILY | WD40 repeat-like | 610 | 896 | IPR036322 | GO:0005515 | |
Aev08g2641 | 896 | Gene3D | - | 590 | 740 | IPR015943 | GO:0005515 | |
Aev08g2641 | 896 | MobiDBLite | consensus disorder prediction | 230 | 267 | - | - | |
Aev08g2641 | 896 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 673 | 687 | IPR019775 | - | |
Aev08g2641 | 896 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 654 | 689 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 864 | 896 | - | - | |
Aev08g2641 | 896 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 697 | 739 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | SMART | Lish | 8 | 40 | IPR006594 | GO:0005515 | |
Aev08g2641 | 896 | PANTHER | TRANSCRIPTIONAL COREPRESSOR LEUNIG-LIKE PROTEIN | 1 | 896 | - | - | |
Aev08g2641 | 896 | MobiDBLite | consensus disorder prediction | 383 | 543 | - | - | |
Aev08g2641 | 896 | PANTHER | TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 | 1 | 896 | IPR044716 | GO:0003714 | |
Aev08g2641 | 896 | MobiDBLite | consensus disorder prediction | 410 | 456 | - | - | |
Aev08g2641 | 896 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 612 | 653 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | ProSiteProfiles | LIS1 homology (LisH) motif profile. | 8 | 40 | IPR006594 | GO:0005515 | |
Aev08g2641 | 896 | Pfam | WD domain, G-beta repeat | 651 | 686 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | Pfam | WD domain, G-beta repeat | 693 | 730 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | Pfam | WD domain, G-beta repeat | 774 | 809 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | Pfam | WD domain, G-beta repeat | 859 | 896 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | Pfam | WD domain, G-beta repeat | 614 | 643 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | MobiDBLite | consensus disorder prediction | 138 | 164 | - | - | |
Aev08g2641 | 896 | Gene3D | - | 741 | 896 | IPR015943 | GO:0005515 | |
Aev08g2641 | 896 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 779 | 811 | IPR001680 | GO:0005515 | |
Aev08g2641 | 896 | Pfam | LisH | 10 | 36 | IPR006594 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev08g2641 | Aev-Chr8 | 24821537 | 24830503 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev08g2641 | 691 | 895 | Miscellaneous Gene Families | AT5G08390 | 24.762 | 4.57e-13 | 71.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | LUG | Aev08g2641 | WD40 | 0.11 | CL0186 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev08g2641 | - | - | gmx:100816263 | 1218.37 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev08g2641 | 08 | 24821537 | 24830503 | Aev08g2641 | 08 | 24821537 | 24830503 | ECH |