Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2641 ATGTCTCAGACTAACTGGGAAGCTGATAAGATGTTGGATGTTTACATCCATGATTACCTGGTGAAGAGGGATTTGAAGGCTTCTGCTCAGGCTTTTCAAGCTGAGGGGAAAGTATCATCTGACCCTGTTGCTATTGATGCCCCAGGAGGTTTTCTGTTCGAGTGGTGGTCGGTTTTCTGGGACATATTTATTGCCAGGACTAATGAGAAACACTCAGAGGTTGCAGCTTCATATATTGAGACACAGATGATTAAGGCAAGGGAGCAACAGCAGCAGCAACAACAGCCACAACCCCAGCAGTCACAGCATCAACAGCAGCAGCAGCACATGCAGATGCAACAGCTCCTATTGCAGAGGCAAGCACAACAGCAACAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAACAACAGCAGCCACCACAGCCACAACCGCAGCAGCAGCCACCACCACAACAACAGCAAAGTAGGGATAGGGCTCATCTCTTAAATGGCAATACAAATGGGTTGGTTGGGAACCCTGGAACGGCAAATGCAATGGCAACAAAGATGTATGAGGAAAGGTTAAAGAGAGAATCTTTGGATGAAACAGCAATGAAGCAAAGATTTGGTGACAACATGGGTCAGCTCCTGGACCCAAATCACGCCTCAATACTGAAGTCAGCTGCGGCTTCTGGCCAGCCTTCAGGGCAAGTTTTACATGGCTCTGCCGGTGGGATGTCTCCACAAGTTCAAGCTCGTAGCCAGCAATTACCAGGGTCTACTCCGGACATAAAGAGTGAGATTAATCCCGTTTTAAATCCTAGAACTGCGGGTCCTGAAGCATCATTGATGGGAATTCCTGGATCAAATCAAGGTAGTAACAATCTGACTCTGAAGGGTTGGCCATTGACGGGTTTGGACCAACTGCGCTCTGGTCTACTCCAGCAACAGAAACCTTTCATGCAGGGTCCTCAGCCTTTTCATCAACTTCAGATGTTGACACCACAGCATCAACAACAGATCATGCTTGCACAACAAAATTTGGCATCTCCATCTGCTAGTGATGAGAGTAGAAGACTCAGAATGCTATTGAATAATAGGAGCATGAGCATGAATAAGGATGGTCTTTCAAATCCTGTTGGTGATGTAGTGCCAAATGTTGGATCACCTCTTCAAGGTGGTGCCCCCCCTTTTCCTCGTGGAGATACAGATATGCTAATGAAGTTGAAACTGGCTCAGTTACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAACAGTCAAACACCAATCCACAGCAGCAGCAACTTCAACAGCATTCACTTTCGAATCAGCAATCTCAGAATTCAAATCATAGCATGCATCAGCAAGATAAAGTAGGGGGAGGTGCTGGCAGTGTCACTGTGGATGGTGGCATGTCAAACTCCTTTAGAGGAAATGATCAGGTTTCAAAAAACCAGATTGGGAGAAAGAGAAAGCAACCTGTATCTTCTTCAGGACCTGCCAATAGCTCAGGAACTGCAAATACAACAGGCCCATCACCGAGTTCAGCACCCTCAACGCCCTCAACTCACACTCCGGGTGATGTGATGTCAATGCCTGCTATGCCTCATAGTGGTAGTTCTTCAAAGCCGCTAATGATGTTTGGCACTGATGGCACTGGAACTCTTACATCATCTTCAAACCAGCTGGCTGATGTGGATCGCTTTGTGGAGGATGGATCTCTTGATGAAAATGTCGAGTCTTTTTTATCCCATGATGATACAGACCCCAGAGATACTGTTGGTCGTTGTATGGATGTAAGCAAAGGCTTCACATTTTCTGATGTAAATTCTGTACGTGCTAGCACAAGCAAAGTTGTATGTTGTCATTTCTCATCTGATGGGAAATTGCTTGCAAGTGGTGGGCATGACAAAAAGGCTGTTTTATGGCACACGGATACCCTAAAGCAGAAGGCTACTCTTGAAGAACATTCATCTATGATCACTGATGTTCGTTTCAGTCCAAGCTTGTCTCGTCTGGCAACATCTTCGTTCGACAAAACTGTCAGGGTTTGGGATATTGACAATCCTGGGTATTCGCTTCGCACCTTTACAGGACATTCTGCATCTGTTAGGTCATTAGATTTTCACCCGAATAAAGATGACCTTATCTGCTCTTGTGATGGTGATGGTGAGATACGATATTGGAGCATAAATAATGGAAGTTGTGCTAGAGTCTCCAAGGGTGGCACCACTCAGATGAGATTCCAACCTCGTCTAGGAAGGTACCTTGCTGCAGCTGCCGAGAATATTGTGTCCATACTTGATGTTGAGACACTACAATGCCGATATTCATTAAAGGGACACACGAAGCAAATAAACTCGGTGTTTTGGGACCCTTCTGGGGAGTTGCTGGCATCTGTGAGTGAGGACTCTGTCAGGGTTTGGACTGTGGGAAGTGGGAGCGAAGGGGATTGTGTTCATGAGCTTAGCTGTAATGGCAGCAAGTTTCAATCATGTGTTTTCCACCCAACATACCCTTCATTGCTCGTCATTGGCTGTTACCAGTCGTTGGAGCTCTGGAACATGACGGAGAACAAGACGATGACACTTCCGGCTCATGAGGGACTTATCGCGGCCCTCGCGGTTTCGACCGTAAACGGTTATGTTGCTTCTGCCAGTCATGACAAGTTCATCAAGCTCTGGAAGTGA 2691 0.4675 MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQMIKAREQQQQQQQPQPQQSQHQQQQQHMQMQQLLLQRQAQQQQQQQQQQQQQQQQQQQQQQQQPPQPQPQQQPPPQQQQSRDRAHLLNGNTNGLVGNPGTANAMATKMYEERLKRESLDETAMKQRFGDNMGQLLDPNHASILKSAAASGQPSGQVLHGSAGGMSPQVQARSQQLPGSTPDIKSEINPVLNPRTAGPEASLMGIPGSNQGSNNLTLKGWPLTGLDQLRSGLLQQQKPFMQGPQPFHQLQMLTPQHQQQIMLAQQNLASPSASDESRRLRMLLNNRSMSMNKDGLSNPVGDVVPNVGSPLQGGAPPFPRGDTDMLMKLKLAQLQQQQQQQQQQQQSNTNPQQQQLQQHSLSNQQSQNSNHSMHQQDKVGGGAGSVTVDGGMSNSFRGNDQVSKNQIGRKRKQPVSSSGPANSSGTANTTGPSPSSAPSTPSTHTPGDVMSMPAMPHSGSSSKPLMMFGTDGTGTLTSSSNQLADVDRFVEDGSLDENVESFLSHDDTDPRDTVGRCMDVSKGFTFSDVNSVRASTSKVVCCHFSSDGKLLASGGHDKKAVLWHTDTLKQKATLEEHSSMITDVRFSPSLSRLATSSFDKTVRVWDIDNPGYSLRTFTGHSASVRSLDFHPNKDDLICSCDGDGEIRYWSINNGSCARVSKGGTTQMRFQPRLGRYLAAAAENIVSILDVETLQCRYSLKGHTKQINSVFWDPSGELLASVSEDSVRVWTVGSGSEGDCVHELSCNGSKFQSCVFHPTYPSLLVIGCYQSLELWNMTENKTMTLPAHEGLIAALAVSTVNGYVASASHDKFIKLWK* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2641 896 MobiDBLite consensus disorder prediction 468 527 - -
Aev08g2641 896 CDD WD40 612 896 - -
Aev08g2641 896 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 654 689 - -
Aev08g2641 896 MobiDBLite consensus disorder prediction 87 112 - -
Aev08g2641 896 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 697 735 - -
Aev08g2641 896 SMART WD40_4 772 810 IPR001680 GO:0005515
Aev08g2641 896 SMART WD40_4 857 896 IPR001680 GO:0005515
Aev08g2641 896 SMART WD40_4 647 686 IPR001680 GO:0005515
Aev08g2641 896 SMART WD40_4 605 644 IPR001680 GO:0005515
Aev08g2641 896 SMART WD40_4 690 730 IPR001680 GO:0005515
Aev08g2641 896 SMART WD40_4 816 855 IPR001680 GO:0005515
Aev08g2641 896 ProSiteProfiles Trp-Asp (WD) repeats profile. 864 896 IPR001680 GO:0005515
Aev08g2641 896 Coils Coil 112 145 - -
Aev08g2641 896 SUPERFAMILY WD40 repeat-like 610 896 IPR036322 GO:0005515
Aev08g2641 896 Gene3D - 590 740 IPR015943 GO:0005515
Aev08g2641 896 MobiDBLite consensus disorder prediction 230 267 - -
Aev08g2641 896 ProSitePatterns Trp-Asp (WD) repeats signature. 673 687 IPR019775 -
Aev08g2641 896 ProSiteProfiles Trp-Asp (WD) repeats profile. 654 689 IPR001680 GO:0005515
Aev08g2641 896 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 864 896 - -
Aev08g2641 896 ProSiteProfiles Trp-Asp (WD) repeats profile. 697 739 IPR001680 GO:0005515
Aev08g2641 896 SMART Lish 8 40 IPR006594 GO:0005515
Aev08g2641 896 PANTHER TRANSCRIPTIONAL COREPRESSOR LEUNIG-LIKE PROTEIN 1 896 - -
Aev08g2641 896 MobiDBLite consensus disorder prediction 383 543 - -
Aev08g2641 896 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 896 IPR044716 GO:0003714
Aev08g2641 896 MobiDBLite consensus disorder prediction 410 456 - -
Aev08g2641 896 ProSiteProfiles Trp-Asp (WD) repeats profile. 612 653 IPR001680 GO:0005515
Aev08g2641 896 ProSiteProfiles LIS1 homology (LisH) motif profile. 8 40 IPR006594 GO:0005515
Aev08g2641 896 Pfam WD domain, G-beta repeat 651 686 IPR001680 GO:0005515
Aev08g2641 896 Pfam WD domain, G-beta repeat 693 730 IPR001680 GO:0005515
Aev08g2641 896 Pfam WD domain, G-beta repeat 774 809 IPR001680 GO:0005515
Aev08g2641 896 Pfam WD domain, G-beta repeat 859 896 IPR001680 GO:0005515
Aev08g2641 896 Pfam WD domain, G-beta repeat 614 643 IPR001680 GO:0005515
Aev08g2641 896 MobiDBLite consensus disorder prediction 138 164 - -
Aev08g2641 896 Gene3D - 741 896 IPR015943 GO:0005515
Aev08g2641 896 ProSiteProfiles Trp-Asp (WD) repeats profile. 779 811 IPR001680 GO:0005515
Aev08g2641 896 Pfam LisH 10 36 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2641 Aev-Chr8 24821537 24830503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2641 691 895 Miscellaneous Gene Families AT5G08390 24.762 4.57e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Aev08g2641 WD40 0.11 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2641 - - gmx:100816263 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2641 08 24821537 24830503 Aev08g2641 08 24821537 24830503 ECH